Variovorax sp. PMC12: C4F17_14545
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Entry
C4F17_14545 CDS
T05380
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00540
Lipopolysaccharide biosynthesis
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C4F17_14545
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
C4F17_14545
Enzymes [BR:
vam01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
C4F17_14545
Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
Lipid A
C4F17_14545
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Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AVQ82082
UniProt:
A0A2P1VA84
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All DBs
Position
1:complement(3115750..3116739)
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AA seq
329 aa
AA seq
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MSIGAIARGIGRHPRGAPKIAGVLQQRTLKSISRAVGVGLHSGQRVELTLRPAPADTGIV
FRRVDLPEPVDIRMTAESVTDTRLASTVSTGGAKVQTVEHIMSACAGLGIDNLYIDITAD
EVPILDGSASSFVFLLQSAGIALQKAPRRFIRVTRKVEVREGEGANEKWARLEPYHGFKL
SFEIDFDHRVVNSTGQRVEFDLGTDSYSRDIARARTFGFTKEVEYMRSKGLALGGGLDNA
IVMDDTKVLNAGGLRYDDEFVKHKILDAMGDLYIIGKPLLAAYTAFRSGHALNNKLLREL
LSHSDAYEVVTFEDEKRAPRGFGEVARAW
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcggtgccatagccaggggcataggccgccacccccgtggcgcgcctaaaatc
gccggcgtgctgcaacaacgaaccctcaagtcgatcagccgcgccgtgggcgtggggctc
cacagcggccaacgcgtggaactgaccctgcgaccggccccggccgacacgggcatcgtg
ttccgccgcgtcgacctgccggagcctgtcgacatccgcatgaccgccgagtcggtcacc
gacacgcgactggcgtccacggtctccaccggtggcgccaaggtgcagaccgtcgagcac
atcatgtcggcctgcgcgggcctcggcatcgacaacctctacatcgacatcacggccgac
gaagtgccgatcctcgacgggtcggcctcttcgttcgtgttcctgctgcagagcgcgggc
atcgcgctgcagaaggcgccgcgccgcttcattcgcgtgacccgcaaggtcgaggtgcgc
gagggcgagggcgccaacgagaagtgggcgcggctggagccgtaccacggcttcaagctg
agcttcgagatcgacttcgaccaccgcgtcgtcaattccaccggccagcgcgtggagttc
gacctgggcaccgactcctacagccgcgacatcgcgcgcgcccgcaccttcggcttcacg
aaagaggtcgagtacatgcgcagcaagggcctcgcgctcggcggtggcctggacaacgcc
atcgtgatggacgacaccaaggtgctcaatgcaggcggcctgcgctacgacgacgagttc
gtgaagcacaagatcctcgacgccatgggcgacctgtacatcatcggcaagccgctgctg
gccgcgtacaccgcgttccgctcgggccatgcgctgaacaacaagctgctgcgcgagctg
ctctcgcacagcgacgcctacgaagtcgtgaccttcgaagacgagaagcgcgcaccgcgc
ggcttcggcgaagtcgcccgcgcctggtag
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