Variovorax sp. PMC12: C4F17_16940
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Entry
C4F17_16940 CDS
T05380
Name
(GenBank) short-chain dehydrogenase
KO
K00059
3-oxoacyl-[acyl-carrier protein] reductase [EC:
1.1.1.100
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00061
Fatty acid biosynthesis
vam00780
Biotin metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01212
Fatty acid metabolism
vam01240
Biosynthesis of cofactors
Module
vam_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
C4F17_16940
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
C4F17_16940
09110 Biosynthesis of other secondary metabolites
00333 Prodigiosin biosynthesis
C4F17_16940
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vam01004
]
C4F17_16940
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.100 3-oxoacyl-[acyl-carrier-protein] reductase
C4F17_16940
Lipid biosynthesis proteins [BR:
vam01004
]
Fatty acid synthase
Component type
C4F17_16940
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
adh_short_C2
adh_short
KR
Epimerase
RmlD_sub_bind
SDR
GDP_Man_Dehyd
3HCDH_N
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AVQ82502
LinkDB
All DBs
Position
1:complement(3670832..3671575)
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AA seq
247 aa
AA seq
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MNNSSTEKPLVLVTGGASGMGRAIVERMAQGGWRVVMADYNGELAERETQVLRSAGLDVE
CRAIDLTDEAAVRAMVQQLPPLTALVNNAGIFDERAFLDVTSADFRRMYEVNLLAVATLT
QEAARKMADGARIVNIASRAYLGAKNHAHYVASKAALVGYTRASAMELAPRGIMVNAIAP
GLIDTPLLRALSPERLAAQLALQPTGAAGRPEDIAHAVAFFASPATCFVTGQVLFVDGGK
SLGGSGS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaataacagcagtacagagaagccgctcgtcctggtgacgggcggcgccagcggcatg
ggccgcgccatcgtcgagcgcatggcgcagggcggctggcgcgtggtcatggccgactac
aacggcgagcttgccgagcgcgaaacgcaggtgctgcgcagcgcgggcctcgacgtggaa
tgccgcgccatcgacctcaccgacgaagccgccgtgcgcgcgatggtgcagcagctgccg
ccgctcaccgcgctggtcaacaacgcaggcatcttcgacgagcgagccttcctcgacgtg
acctcggcggacttccgccgcatgtacgaagtgaacctgctggccgtggccacactcacg
caagaggccgcgcgcaagatggcggacggcgcgcgcatcgtcaacatcgcatcgcgtgcc
tacctgggcgcgaaaaaccacgcgcactacgtggcctcgaaggcggcactggtcggctac
acgcgcgccagcgcgatggagcttgcgccgcgcggcatcatggtcaacgccatcgcgccg
gggctgatcgacacgccgctgctgcgcgcgctgtcgcccgaacgcctggccgcgcagctt
gcgctgcagcccaccggcgcggcgggacggcccgaggacatcgcgcacgcggtggccttc
ttcgcgtcgccggcgacctgcttcgttaccgggcaggtgctgttcgttgacggcggcaag
tcgctcggcgggtcggggtcctga
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