Variovorax sp. PMC12: C4F17_19940
Help
Entry
C4F17_19940 CDS
T05380
Name
(GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00010
Glycolysis / Gluconeogenesis
vam00020
Citrate cycle (TCA cycle)
vam00620
Pyruvate metabolism
vam00785
Lipoic acid metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
vam01210
2-Oxocarboxylic acid metabolism
Module
vam_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
C4F17_19940
00020 Citrate cycle (TCA cycle)
C4F17_19940
00620 Pyruvate metabolism
C4F17_19940
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
C4F17_19940
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
C4F17_19940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
AVQ83052
LinkDB
All DBs
Position
1:4313335..4315992
Genome browser
AA seq
885 aa
AA seq
DB search
MNAPISADQMRALLLDTPLSHDPDPAETAEWRDAFLALAQSQGPQRAKQMLTELARLARQ
QRIGWQPELATPYVNTIAAQDQPPFPGDLAIEEKLASLMRWNALAMVAKANQAYGELGGH
IASYASAADLFETGFNHFFHARSDAHRGDLVFFQPHSAPGVYARAYLEGRLSEEDLKHYR
QELTAPAFTDGSGARGLCSYPHPYLMPDFWQFPTGSMGIGPISSIYHARFMRYLTHRNLL
DCEGRKVWGVFGDGEMDEPESMSALTLAAREKLDNLVWVVNCNLQRLDGPVRGNGRIIDE
LEKLFAGAGWNVVKLVWGSDWDGLFAQDVSGALARVFANTVDGQMQTFAAKDGRFNRDNF
FGQNPELARLAEGMTDEQIDRLKRGGHDLVKIHAAYAAAARHKGQPTVILAHTKKGYGMG
SAAQGKMTTHSHKKMGDVDLIEFRDRFNLPLTDAQATAMDFYRPPEDSAEMRYLRQHREA
LGGAMPRRETACDVVAKPDIASYAQFATAAAGKEMSTTMAFVRMLGNLLKDPALGPRIVP
IVADEARTFGMANLFKQVGIYSSVGQRYAPEDIGSVLSYREATDGQILEEGISEAGAIAS
WTAAATSYSVHGLAMLPFYIYYSMFGFQRVGDAIWAAADQRARGFLLGATSGRTTLGGEG
LQHQDGSSHLVAATIPNCKAYDPAYAGEMAVIVDAGIREMMVEQQDVFYYVTLMNENYAQ
PDVPEGAEGDILRGCYRFGTYAPASGKAKKKVTLMGSGAILTEVVKAAQLLADEGIEAEV
FSVTSWSELARDGLACEQRALAGEKDAGAAFVARQLGKGGKAPIVAATDYVRAVPESVRA
FLPEGRRYITLGTDGFGRSDTRAALRGFFGVDAASIASAARHALA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccccgatttccgccgaccagatgcgcgcgctgctgctcgatacgccgctgtcg
cacgaccccgatcccgccgagaccgccgaatggcgcgacgccttcctggcgctggcgcag
tcgcagggtccgcagcgcgccaagcagatgctcaccgagctggcacggctggcgcgccag
cagcgcatcggctggcagcccgaactggccacgccgtacgtcaacaccatcgccgcgcag
gaccagccgccgtttccgggcgacctggccatcgaggaaaagctcgcctcgctgatgcgc
tggaacgcgctcgcgatggtggccaaggcgaaccaggcgtatggcgaactcggcggccac
atcgccagctatgccagcgcggccgacctgttcgaaaccggcttcaaccatttcttccat
gcgcgcagcgacgcccatcgcggcgacctggtgttcttccagccgcatagcgcgccgggc
gtgtatgcccgtgcctatctcgaaggccgcctgagcgaggaagacctgaagcactaccgc
caggaactcaccgcgcccgccttcaccgacggcagcggcgcgcgcggcctgtgcagctat
ccgcatccgtacctgatgccggacttctggcagttccccaccggctcgatgggcatcggc
cccatcagctcgatctaccacgcgcgcttcatgcgctacctcacgcaccgcaacctgctc
gactgcgaaggccgcaaggtgtggggcgtgttcggcgacggcgagatggacgagcccgaa
tcgatgagcgcgctgacgctcgccgcgcgcgagaagctcgacaacctcgtgtgggtcgtc
aactgcaacctgcagcggctcgacggcccggtgcgcggcaacggccgcatcatcgacgag
ctcgagaagctctttgccggcgcgggctggaacgtcgtcaagctggtgtggggcagcgac
tgggacggccttttcgcacaggacgtgagcggcgcactggcccgcgtgttcgccaacacc
gtcgacggccagatgcagaccttcgcggccaaggacggccgcttcaaccgcgacaacttc
ttcggacagaaccccgagctcgcgcgcctggccgaaggcatgaccgacgagcagatcgac
cgcctgaagcgcggcggccacgacctggtgaagatccacgcggcctacgcggcggcggcc
cggcacaagggccagcccaccgtgatcctcgcccacaccaagaagggctacggcatgggc
agcgccgcgcagggcaagatgaccacgcactcgcacaagaagatgggcgacgtggacctg
atcgaattccgcgaccgcttcaacctgccgctgaccgacgcgcaggccacggcaatggac
ttctaccgcccgccggaagacagcgccgagatgcgctacctgcgccagcaccgcgaagcg
ctcggcggcgcgatgccacggcgcgagaccgcctgcgacgtggtggccaagcccgacatc
gcgagctacgcgcagttcgcgaccgcggccgccggcaaggaaatgagcaccaccatggcc
ttcgtgcgcatgctgggcaacctgctgaaagacccggccctgggcccgcgcatcgtgccc
atcgtggccgacgaggcgcgcaccttcggcatggccaacctgttcaagcaggtgggcatc
tattcgagcgtgggccagcgctatgcgccggaagacatcggctcggtgctgagctaccgc
gaggccaccgacgggcagatcctcgaggaaggcatcagcgaggccggcgccatcgcgagc
tggacggcggctgccaccagctacagcgtgcacggcctggcgatgctgccgttctacatc
tactactcgatgttcggcttccagcgcgtgggcgatgccatctgggccgcggccgaccag
cgtgcgcgcggcttcctgctgggcgccacgtcggggcgcaccacgctcggcggcgaaggc
ctgcagcaccaggacggcagcagccacctggtggccgcgaccattcccaactgcaaggcc
tacgacccggcgtatgcgggcgagatggcggtgatcgtcgacgcgggcatccgcgagatg
atggtcgagcagcaggacgtgttctattacgtcacgctcatgaacgagaactacgcgcag
cccgacgtgcccgagggcgcggaaggcgacatcctgcgcggctgctaccgcttcggcact
tacgcgccggcatcgggcaaggcgaagaagaaggtcacgctgatgggctcgggcgcgatc
ctcaccgaagtcgtcaaggcggcgcagctgctggccgacgaaggcatcgaggccgaggtg
ttcagcgtcacgagctggagcgaactcgcgcgcgacgggctggcctgcgagcagcgcgca
ctggctggcgagaaagatgccggcgctgcgttcgtcgcgcggcagctcggcaagggcggc
aaggcgcccatcgttgccgccaccgactacgtgcgcgccgtgcccgagagcgtgcgcgcc
ttcctgcccgaaggccgccgctacatcacgctgggcaccgacggcttcggtcgcagcgac
acgcgcgctgcgctgcgcggcttcttcggggtggatgcggccagcatcgcgagcgccgcg
cgccacgcgctggcctga
DBGET
integrated database retrieval system
