Variovorax sp. PMC12: C4F17_24530
Help
Entry
C4F17_24530 CDS
T05380
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vam
Variovorax sp. PMC12
Pathway
vam01501
beta-Lactam resistance
vam01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C4F17_24530
01503 Cationic antimicrobial peptide (CAMP) resistance
C4F17_24530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_24530
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_24530
01504 Antimicrobial resistance genes [BR:
vam01504
]
C4F17_24530
Chromosome and associated proteins [BR:
vam03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C4F17_24530
Transporters [BR:
vam02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C4F17_24530
Antimicrobial resistance genes [BR:
vam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C4F17_24530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
HlyD_3
Motif
Other DBs
NCBI-ProteinID:
AVQ83861
LinkDB
All DBs
Position
1:complement(5235658..5236812)
Genome browser
AA seq
384 aa
AA seq
DB search
MTSKLLFSLSLLSVLVLAACGAKQPPATADTPPPEVGVVTLRATDVPVHTELAGRTAAFR
VSEVRPQVNGIVRKRLFEEGSMVRAGQVLYEIEPGPFEAAHEQAQAALATSQAGIASLRG
KAGRFGELVKANAVSRQEHEEAQAALVQAEAGVKAAQAAVKAARINLGFTRITAPIAGRI
GRSSVTEGALVAPGQTVALATIQRLDPIYVDVVQSSLDLTRLKRRFISGDMAPASAQVGL
RMEDGLPYSHTGTMKFSEVAVDPATGSVTLRAEFPNPQGLLLPGMYVRAQVESGVERQAI
LAPQRGVARNEKGEPTALVVGAGDKVELRALELRTTTGDQWIVSKGLREGDRLVVDGLQR
AQPGAKVKPVPVTAANTATASSAD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaagctcctgttttcgctttcgctgctttccgtgctcgtgctcgccgcatgc
ggcgccaagcagcctcccgccaccgccgacacgccgccgcccgaagtcggcgtggtcacg
ctgcgtgccaccgacgtaccggtgcacaccgaactggcgggccgcaccgccgctttccgc
gtgtccgaagtgcggccgcaggtcaacggcatcgtgcgcaagcgcctgttcgaggaaggc
agcatggtccgcgcgggccaggtgctttatgagatcgagcccggccccttcgaggccgcg
cacgaacaggcccaggccgcgctcgccacctcgcaggccggcatcgcgagcctgcggggc
aaggccgggcgcttcggcgaactggtcaaggccaatgcggtgagccgccaggagcacgag
gaggcgcaggccgcgctggtgcaggcagaggccggcgtgaaggccgcgcaagcggcggtg
aaggcggcgcgcatcaacctcggcttcacccgcatcaccgcgcccatcgcgggacgcatc
gggcgctccagcgtgaccgaaggcgcgctggtggcgccgggccagacggtggcgctggcc
accatccagcggctggacccgatctatgtcgacgtggtgcagtcgagcctggatctgacg
cggctcaagcgccgcttcatctccggcgacatggcgcccgccagcgcgcaggtcggcctg
cgcatggaagacggcctgccctattcgcacacgggcaccatgaagttctccgaagtcgcg
gtcgatccggccacgggctcggtcacgctgcgcgcggagttcccgaacccgcaggggttg
ctgctgcccggcatgtacgtgcgcgcgcaggtcgagtccggcgtggagcggcaggccatc
ctcgcgccgcagcgcggcgtggcacgcaacgagaaaggcgagcccaccgccctggtggtc
ggcgcgggcgacaaggtcgagttgcgcgcactggagctgcgcaccaccacgggcgaccag
tggatcgtgagcaagggcctgcgcgaaggcgaccgcctggtggtcgacgggctgcagcgc
gcccagcccggagccaaggtgaagccggtaccggtgacggccgcgaacaccgccacggct
tcttccgcagattga
DBGET
integrated database retrieval system
