Variovorax sp. PMC12: C4F17_31810
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Entry
C4F17_31810 CDS
T05380
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vam
Variovorax sp. PMC12
Pathway
vam01501
beta-Lactam resistance
vam01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C4F17_31810
01503 Cationic antimicrobial peptide (CAMP) resistance
C4F17_31810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_31810
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_31810
01504 Antimicrobial resistance genes [BR:
vam01504
]
C4F17_31810
Chromosome and associated proteins [BR:
vam03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C4F17_31810
Transporters [BR:
vam02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C4F17_31810
Antimicrobial resistance genes [BR:
vam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C4F17_31810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AVQ85590
LinkDB
All DBs
Position
2:961913..963121
Genome browser
AA seq
402 aa
AA seq
DB search
MRPPLTYGLTFLTAVMSTCMLVACGKPPGGPPPAADTPEVGVVTVQPQRVAITTELPGRT
VPFLIADVRPQVGGIVKTRQFREGSDVKAGEALYQIDPATYKATYDSNLAALAKAQASLV
TTRLKAERYKELVAIKAVSQQDYDDAAASLQQGEADVASAKANVETSRINLAYARIDAPI
SGRIGKSSVTPGALVTASQSTALATIQQLDPIYVDVTQPSAAMLQLKQAMARGDLQKSGA
NAAKVRLLLEDGSTYPLEGKLEFSDVTVDQNTGAITLRAVFPNPDADLLPGMYVRAVLQE
GVKDQALMVPQQAVSRDGAGKPVAYVVDAQHKLQRRALETERAIGDQWLVRSGLKAGDQL
VVDGQQRAAPGVEVKTVQWNPKSVPGTETAKAAPSEPAGAAN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccccctctgacctacggcctgacattcctcacggccgtcatgtccacctgcatg
ctcgtggcctgcggcaagccgccgggcggcccgcctccggcggccgacacccctgaagtc
ggcgtggtcacggtgcagccgcagcgcgtggccatcacgaccgagctgccagggcgcacc
gtgccctttctcatcgccgacgtgcgcccgcaggtcggcggcatcgtcaagacccgccag
ttccgcgagggcagcgacgtgaaggccggcgaggcgctctaccagatcgatcccgccacc
tacaaggcgacctacgacagcaatctcgccgcgctcgccaaggcgcaggccagcctggtg
accacgcggctcaaggccgagcgctacaaggagctggtggccatcaaggccgtgagccag
caggactacgacgacgccgccgcttcgctgcagcaaggcgaggccgacgtcgcctcggcc
aaggccaatgtcgaaacgagccgcatcaacctcgcctacgcacgcatcgacgcgccgatc
tcggggcgcatcggcaagtcgtcggtcacgccgggcgcattggtcacggccagccaatcg
accgcgctggccaccatccagcagctcgacccgatctacgtcgacgtgacccagcccagc
gccgcgatgcttcagctcaagcaggcgatggcgcgcggcgacctgcagaagagcggcgcc
aatgccgcgaaagtgcggctgctgctggaagacggcagcacctacccgctcgagggcaag
ctcgagttctccgacgtcaccgtggaccagaacacaggcgcgatcacgctgcgcgcggtg
ttccccaaccccgacgcggatctgctgcccggcatgtacgtgcgcgcggtgctgcaggaa
ggcgtgaaggatcaggcgctcatggtgccgcagcaggcggtgtcgcgcgacggtgccggc
aagcccgtggcctatgtggtggacgcccagcacaagctgcagcggcgcgcactcgagacc
gagcgcgccatcggcgaccagtggctggtgcgcagcggcctgaaggccggcgaccagctg
gtggtggacggccagcagcgcgcggcgccgggcgtcgaggtgaagacggtgcaatggaac
cccaagtccgtgccaggcaccgagaccgccaaggcagctccgtccgagcctgccggcgcg
gccaactga
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