Vagococcus zengguangii: FA707_05215
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Entry
FA707_05215 CDS
T05965
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vao
Vagococcus zengguangii
Pathway
vao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FA707_05215 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vao03400
]
FA707_05215 (nth)
Enzymes [BR:
vao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FA707_05215 (nth)
DNA repair and recombination proteins [BR:
vao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FA707_05215 (nth)
Prokaryotic type
FA707_05215 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
DUF4294
HRDC
Motif
Other DBs
NCBI-ProteinID:
QCI86400
UniProt:
A0A4D7CW44
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All DBs
Position
1117880..1118518
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AA seq
212 aa
AA seq
DB search
MLSKAKTMEAIDLIASMYPDAECELVHKNPFELLTAVILSAQTTDVSVNKVTPYLFEKFP
TPQALAEGELTEIEEVIKTIGLYRNKAKHIKGCSQKLVAEFAGEVPKTIKELVSLPGVGK
KTANVVVSTAFGVPAIAVDTHVERVSKRLRIVKQSANVTEVEETLMKKIPKERWSKTHHQ
LIFFGRYHCTARKPKCEACPLLYMCAEGQKNL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgctttctaaagctaaaacgatggaagcaatcgatcttatcgcttccatgtatccagat
gcagagtgtgaattggtccataaaaatccttttgagttattaactgcggttattttgagt
gcacaaacaaccgatgtttcggtaaacaaggtaacgccatacttatttgagaaatttcct
acgccgcaagctttggccgaaggcgaattaacagaaatagaagaagtgattaaaacaatc
ggattgtatcgaaataaagccaaacatattaaaggctgtagccaaaaattggtcgctgag
tttgctggggaagttcccaaaacgattaaagaactagttagtttaccaggagttgggaag
aaaacggcaaatgtcgttgtaagtacggcttttggagttccagctattgcagtagataca
catgttgaacgtgtttctaaacgtttaagaatcgtaaaacaatcagcaaatgtcactgaa
gtagaagagacattgatgaaaaaaatacccaaagaacgttggtccaaaacacatcatcaa
ttaatcttttttggccgttatcattgtactgcgagaaagccgaagtgtgaagcctgccca
ttactatatatgtgcgcagaaggacaaaaaaatttatag
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