Vagococcus zengguangii: FA707_07760
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Entry
FA707_07760 CDS
T05965
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
vao
Vagococcus zengguangii
Pathway
vao03030
DNA replication
vao03410
Base excision repair
vao03420
Nucleotide excision repair
vao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FA707_07760 (ligA)
03410 Base excision repair
FA707_07760 (ligA)
03420 Nucleotide excision repair
FA707_07760 (ligA)
03430 Mismatch repair
FA707_07760 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vao03032
]
FA707_07760 (ligA)
03400 DNA repair and recombination proteins [BR:
vao03400
]
FA707_07760 (ligA)
Enzymes [BR:
vao01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
FA707_07760 (ligA)
DNA replication proteins [BR:
vao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FA707_07760 (ligA)
DNA repair and recombination proteins [BR:
vao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
FA707_07760 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FA707_07760 (ligA)
MMR (mismatch excision repair)
DNA ligase
FA707_07760 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FA707_07760 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
QCI86867
UniProt:
A0A4D7CWX6
LinkDB
All DBs
Position
complement(1639242..1641251)
Genome browser
AA seq
669 aa
AA seq
DB search
MTENQQAKMLELNRLLKQYAKEYYEQDQPSVTDAEYDHLYQELVALEAAHPELKLKDSIT
QEVGGRVLSGFEKVKHETAMLSLGNAFNYQDLVAFEERIKKLVSGPITYNCELKIDGLAI
SLKYQDGKFVQGATRGDGKIGENITENLKQVKDIPQILPEPLTLEVRGECFMPKSSFVEL
NEEREAQGENIFANPRNAAAGSLRQLDTRVVAKRNLSSFIYAVATPEALALTSQSSGLAK
MNELGFHINPEGIVCESIEEVWNYIQTYQEKRHDLPYEIDGIVIKVNEFALQEEIGYTVK
APKWAIAYKFPAEEAQTKLLDIEWTVGRTGVVTPTAVMEPVQLAGTTVARASLHNMDLIE
ARDIRLNDYVMVHKAGDIIPEVTRSIADKREVGSQPYQAPTHCPECQSELVHLDEEVALR
CINPMCPAQIKEGVIHFVSRNAMNIDGMGPRVIEQLFEKELIKDVADLYKLTLEQLLTMD
KVKEKSANNLLQAIEASKQNSLERLLFGLGIRHVGAKAAQLIAEHFGNMAAIQQATREEL
TTIDSLGEVIADSLVTYFSKEEATTLIQEFEQVGVNLTYKGLTSADKASIDSVFQGKTVV
LTGTLTTYKRNDAKKMIEALGGKVTGSVSKKTDIVIAGEEAGSKLTKAQELGVTVWTEAQ
MVEAFERGE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatcaacaagcaaaaatgctcgaattaaatcgtttgttaaagcagtatgcc
aaagaatattatgagcaagatcaaccatctgtcaccgatgcagagtatgatcatttatat
caagaattagtcgccctagaagcggctcatccagaactgaagctgaaagactcgattacc
caagaagtaggcgggcgcgttctttctggttttgaaaaagtcaaacacgaaacagctatg
ttaagtttaggcaatgcctttaactaccaagatttagtcgcgtttgaagaacgcattaaa
aaactagtatcaggtccaattacttataattgtgaattgaaaatcgacgggctagctatt
tctttaaaatatcaagatggcaagtttgttcaaggggcaactcgtggtgacggtaaaatt
ggtgagaatattactgagaacttgaaacaagtcaaagatattccgcagatcttaccagaa
ccgttaacgttagaagttcgcggtgagtgctttatgccgaagtcttcttttgtggaattg
aatgaggaacgtgaagcacaaggggaaaatatttttgctaatccacgtaatgcggctgct
ggtagtttacgtcagctagatacacgcgtagtagcgaaacgcaatttaagtagctttatt
tatgcagttgcgacaccagaagcattagctttaacctcacaatcatcaggtttagcgaag
atgaacgaactaggttttcacattaatcctgaagggattgtgtgcgagtcgattgaagaa
gtttggaactatattcaaacttatcaagaaaaacgtcatgatttgccgtatgaaattgat
gggattgtgattaaagttaacgagtttgcgttacaagaagaaattgggtataccgttaaa
gcaccaaagtgggcgattgcctataaattcccagctgaagaagcgcaaacgaaattgcta
gatatcgagtggacagttggccgtacgggagttgtaacgccaacagcggtgatggaacca
gtgcaactagctggtacaaccgtagctcgtgcaagtctgcataacatggatctaatcgag
gcgcgagatattcgcttaaatgattatgtgatggtccataaagcaggggacattattcca
gaagtaacgcgttcgatagcagataagcgtgaagtgggtagtcaaccttatcaagcccca
acacattgtcctgaatgccaaagtgaactcgttcatcttgacgaagaggttgcactacgt
tgtattaatccaatgtgtcctgcccaaattaaagaaggcgtgattcattttgtttctcgt
aatgcgatgaatattgacggtatgggaccccgagtgattgaacaactattcgaaaaagaa
ttaattaaagacgttgctgatttatataaattaacgttagaacaattgttaacgatggac
aaagtcaaagaaaaatccgccaacaatttattacaagcaattgaagccagtaagcaaaat
tctttagagcgtttattatttgggttaggtattcgacatgtcggagcgaaagctgcccaa
ttaattgccgaacatttcggtaatatggcggcaatccaacaagcaacgcgtgaagaattg
acgacgattgattcattaggcgaagtcatagcggatagcttagtgacgtatttttcaaaa
gaagaagccacaaccttaattcaagaatttgaacaagtgggggtcaatttaacttataaa
ggcttaacgagtgctgacaaagcatccattgattccgttttccaaggaaaaacggtcgtg
ttgactggtaccttaacaacttataaacgtaatgatgctaagaaaatgattgaagcatta
ggcggcaaagtaacgggtagcgtctcgaagaaaacggatatcgtcattgcgggtgaagaa
gccggtagtaaattaacaaaagcacaggaactaggcgtgactgtgtggacagaagctcaa
atggttgaagcttttgaaagaggtgagtag
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integrated database retrieval system
