Variovorax paradoxus S110: Vapar_0914
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Entry
Vapar_0914 CDS
T00916
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00300
Lysine biosynthesis
vap00550
Peptidoglycan biosynthesis
vap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Vapar_0914
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Vapar_0914
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Vapar_0914
Enzymes [BR:
vap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Vapar_0914
Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Precursor biosynthesis
Amino acid ligase
Vapar_0914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF7739
Motif
Other DBs
NCBI-ProteinID:
ACS17565
UniProt:
C5CNE9
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All DBs
Position
1:1004995..1006557
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AA seq
520 aa
AA seq
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MLTLTSPQLAALWLKERVQGALHADSRPVGAGDGFIAWPGAATDGRRHVASALAQGAAAC
LVEQQGAEAFGFDGDERIASYPGLKAATGPIASAFYDNPSAALEVLAVTGTNGKTSTAWW
LAESLSTLAVPGGVRAPRLDGSAERGVPSPCAVMGTLGIGVPPELVYTGLTTPDPVMMQR
ELRALVERGFGACAIEASSIGIAERRLDSARIAVAVFTNFTQDHLDYHGSMDAYWQAKAE
LFRWPGLRAAVINIDDVHGASLCANLLEAGIGALDVWTVSAAGAPARLMARDVGYDAQGL
RFSVAEHDNDAVERMSTGLIGQYNVANLLGVLGTLRALGLSLAQAVAACSRLTSVPGRME
RVGAADANAAAPLAVVDYAHTPDALDKALAGLRPLAQQRGGALWCVFGCGGDRDPIKRPM
MAAVAERQADRVVVTSDNPRSENPDAIISQVLLGLARPEAAQVQPDRAAAIADAIAQAAP
QDVVLLAGKGHEAWQEIAGQRIPFSDRIHALDALSKRGAA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgctgacactcacttcccctcaactcgccgcgctctggctcaaggagcgcgtgcagggt
gcgctgcatgcggacagccggccggtgggcgcgggcgacggcttcattgcctggcccggc
gcagccaccgacgggcgcaggcacgtggcttcggcactggcgcagggcgccgcggcctgc
ctggtcgagcagcagggcgccgaggccttcggtttcgatggcgacgagcgcattgcaagc
tatccggggctcaaggccgccaccggcccgatcgcatcggccttctacgacaacccctcg
gccgcgctcgaagtgctggccgtgaccggcaccaacggcaagacctccaccgcatggtgg
ctcgccgaatcgctctccacgctggccgtgcccggcggcgttcgcgcgccgcggctggac
ggcagcgccgagcgcggcgtgccttcgccctgcgcggtgatgggcacgctgggcatcggc
gtgccgccggagctcgtctacaccggcctcaccacgcccgacccggtgatgatgcagcgc
gagctgcgcgcgctggtcgagcgcggcttcggcgcctgcgccatcgaggcctcgtcgatc
ggcattgccgaacgccggctcgacagcgcgcgcatcgcggtggccgtgttcaccaatttc
acgcaggaccatctcgactaccacggcagcatggatgcctactggcaggccaaggccgag
ctgttccgctggcccgggctgcgcgccgcggtgatcaacatcgacgacgtgcatggcgcg
agcctgtgcgcgaacctgctcgaggccggcatcggtgcgctcgacgtctggaccgtgtcg
gccgccggcgcgccggcgcggctcatggcgcgcgacgtcggctacgacgcgcagggcctg
cgcttctcggtggccgagcacgacaacgatgcggtggagcgcatgtcgaccggcctgatc
ggccagtacaacgtggccaacctgctgggcgtgctcggcacgctgcgggccctggggctg
tcgctcgcgcaggccgtggcggcctgcagcaggctcaccagcgtgccgggccgcatggag
cgcgtgggcgccgccgatgcgaatgcggctgcgccgctggccgtggtcgactatgcccac
acgcccgacgccctcgacaaggcgctggccggcctgcgcccgcttgcgcagcagcgcggc
ggcgcgctctggtgcgtgttcggctgcggcggcgaccgcgatccgatcaagcgcccgatg
atggccgcggtggccgagcgccaggccgaccgcgtggtcgtgaccagcgacaacccgcgc
agcgagaaccccgacgcgatcatcagccaggtgctgctcggcctcgcgcgccccgaagcg
gcccaggtgcagcccgaccgcgcggccgccatcgccgacgccatcgcgcaggccgcgccg
caggacgtggtgctgctcgccggcaagggccatgaagcctggcaggaaatcgccggccag
cgcataccgttctcggaccgcatccacgcgctcgatgcgctttcgaagcggggtgccgca
tga
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