Variovorax paradoxus S110: Vapar_1421
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Entry
Vapar_1421 CDS
T00916
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00290
Valine, leucine and isoleucine biosynthesis
vap00660
C5-Branched dibasic acid metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01210
2-Oxocarboxylic acid metabolism
vap01230
Biosynthesis of amino acids
Module
vap_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Vapar_1421
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Vapar_1421
Enzymes [BR:
vap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Vapar_1421
4.2.1.35 (R)-2-methylmalate dehydratase
Vapar_1421
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Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ACS18072
UniProt:
C5CSH4
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All DBs
Position
1:complement(1544611..1545261)
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AA seq
216 aa
AA seq
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MQKFTVHKGLVAPMDRENVDTDAIIPKQFLKSIKRTGFGQNLFDEWRYLDAGFPGQDPQS
RKPNPDFVLNQPRYAGASILLARKNFGCGSSREHAPWALDQYGFRAIIAPSYADIFFNNS
FKNGLLPIVLPEAQVAQLFDETFAFPGYTLTIDLERQVVVKPDGGEFAFDVQAFRKYCLI
NGLDDIGLTLRHKDKIKAFEAERLAQKPWLAHTMIS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaattcaccgtgcacaagggcctcgtggccccgatggaccgcgagaacgtcgac
accgacgcgatcattccgaagcagttcctcaagtcgatcaagcgcaccggcttcggccag
aacctgttcgacgaatggcgctacctggacgccggctttccgggccaggatccgcaaagc
cgcaagccgaaccccgacttcgtgctgaaccagccgcgctatgccggcgcctcgatcctc
ttggcgcgcaagaatttcggctgcggctcgtcgcgcgagcatgcgccttgggcgctcgac
cagtacggcttccgcgcgatcatcgcgccgagctatgccgacatcttcttcaacaacagc
ttcaagaacggcctgctgccgatcgtgctgcccgaagcgcaggtggcgcagctgttcgac
gagaccttcgcctttcccggctacacgctcaccatcgacctggagcgccaggtggtcgtg
aagcccgatggcggcgagttcgcgttcgacgtgcaggccttccgcaagtactgcctgatc
aacgggctggacgacatcggcctcacgctgcgccacaaggacaagatcaaggccttcgag
gccgagcggctggcgcagaagccctggctcgcgcacacgatgatctcgtga
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