Variovorax paradoxus S110: Vapar_1432
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Entry
Vapar_1432 CDS
T00916
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00020
Citrate cycle (TCA cycle)
vap00270
Cysteine and methionine metabolism
vap00620
Pyruvate metabolism
vap00630
Glyoxylate and dicarboxylate metabolism
vap00680
Methane metabolism
vap00710
Carbon fixation by Calvin cycle
vap00720
Other carbon fixation pathways
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vap_M00012
Glyoxylate cycle
vap_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Vapar_1432
00620 Pyruvate metabolism
Vapar_1432
00630 Glyoxylate and dicarboxylate metabolism
Vapar_1432
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Vapar_1432
00720 Other carbon fixation pathways
Vapar_1432
00680 Methane metabolism
Vapar_1432
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Vapar_1432
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
Vapar_1432
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Gene cluster
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Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
ACS18083
UniProt:
C5CSI5
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All DBs
Position
1:1554379..1555365
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AA seq
328 aa
AA seq
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MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEL
DDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALN
AVASRNVKVLVVGNPANTNAYIAMKSAPDLPRKNFTAMLRLDHNRAASQIAAKTGKAVAD
IEKLVVWGNHSPTMYADYRFATIKGESVAKMINDQEWNANTFLPTVGKRGAAIIEARGLS
SAASAANAAIDHMRDWALGTNGKWVTMGIPSDGQYGIPKDTMFGFPVTCENGEYKLVEGL
EIDAFSQERINKTLEELQGEQAGVAHLI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaacccgtccgcgttgccgtcaccggtgccgccggccaaatcggttacgcc
ctgttgttccgtatcgcgtccggcgaaatgctcggcaaggaccagccggtcatcctgcaa
ctgcttgagatccccgacgagaaggcccagaaggcgctcaagggcgtgatgatggagctc
gacgactgcgccttcccgctcttggccggcatggaagcccatggcgacccgatgaccgcc
ttcaaggatgccgactacgccctcctggtgggttcgcgtccgcgcggcccgggcatggag
cgtgccgagctgctggccgtcaacggcgccatcttcacggcgcagggcaaggcgctcaac
gccgtcgccagccgcaacgtcaaggtgctggtggtcggcaaccccgccaacaccaacgcc
tacatcgcgatgaagagcgcccccgacctgccgcgcaagaacttcaccgccatgctgcgc
ctggaccacaaccgcgccgccagccagatcgccgccaagaccggcaaggccgtggccgac
atcgaaaagctcgtcgtctggggcaaccactcgcccacgatgtacgccgactaccgcttt
gccaccatcaagggcgaaagcgtcgccaagatgatcaacgaccaggaatggaacgccaac
accttcctgccgaccgttggcaagcgcggcgccgccatcatcgaggcccgcggcctgtcg
tcggctgcctcggccgccaacgccgccatcgaccacatgcgcgactgggccctgggcacc
aacggcaagtgggtcaccatgggcatcccgtcggacggccagtacggcattccgaaggac
acgatgttcggcttcccggtcacctgcgagaacggcgagtacaagctggtcgaaggcctg
gaaatcgacgccttcagccaggaacgcatcaacaagacgctcgaagaactgcaaggcgaa
caggccggcgttgcgcacctgatctaa
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