Variovorax paradoxus S110: Vapar_2171
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Entry
Vapar_2171 CDS
T00916
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00020
Citrate cycle (TCA cycle)
vap00785
Lipoic acid metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01210
2-Oxocarboxylic acid metabolism
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Vapar_2171
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Vapar_2171
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Vapar_2171
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ACS18806
UniProt:
C5CXF0
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All DBs
Position
1:2319122..2321998
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AA seq
958 aa
AA seq
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MSDSSKPTAYAAYQGNTYLFGGNAPYVEEMYENYLSNPGSVPDNWRSYFDALQNVPAADG
SNTRDVPHQPVINAFAERAKQGTTKVVQASGADSELGRKRTAVQQLIAAYRNVGARWADL
DPLKRAERPAIPELEPSFYGFTDADLETVFNTSNTFFGKETMSLRDLLNALRETYCGTIG
AEYMYTTDQNHKRWWQQKLESARTNPQLNADQKKHVLNRLTAAEGLERFLHTKYVGQKRF
SLEGGESFIVSMDELINQAGIKGVQEIVIGMAHRGRLNVLVNSLGKMPADLFAEFDHTAP
EDLPSGDVKYHQGFSSDVTTPGGPVHLSLAFNPSHLEIVNPVVEGSVRARMDRRADPQGK
QVLPVLVHGDAAFAGQGVVMETLALAETRGYFTGGTVHIVINNQIGFTTSDPRDSRSTLY
CSDIVKMIEAPVLHVNGDDPEAVVLATQLALEFRMEFQKDVVVDIICFRKLGHNEQDTPS
LTQPLMYKKIAQHPGTRKLYADKLATQGLGATLGDDMVKAQRAAFDEGRNTVDPVLTNFK
SKYAVDWNPYLNKKWTDAGDTAIPSSEWKRLAEKITTVPAGFTVHPLVKKVLDDRAAMGR
GDVNVDWGMGEHMAFASLVASGYPVRLSGEDSGRGTFTHRHAVLHDQNREKFDEGTYTPL
QNVAENQAPFVVIDSILSEEAVLAFEYGYASNDPNTLVIWEAQFGDFVNGAQVVIDQFIA
SGEVKWGRVNGLTMMLPHGYEGQGPEHSSARLERFMQLSADTNMQVVQPTTASQIFHVLR
RQMVRNLRKPLIIMTPKSLLRNKDATSPLSEFTKGGFQTVIPDSKGLKAEKVKRLIACSG
KVYYDLAKKREEQGTDDVAIIRVEQLYPFPHKAFAAEIKKYPNLADVVWCQDEPQNQGAW
FFVQHYIHENMQEGQKLGYSGRAASASPAVGYSHLHQEQQKALVDGAFGKLKGFVLTK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcctccaagcccacggcgtatgccgcgtaccagggcaacacgtacctcttc
ggtggcaatgcgccctatgtcgaagagatgtacgaaaactacctctccaatcccggcagc
gtgcctgacaactggcgttcgtatttcgacgccctgcagaacgtgcccgcagccgatggc
tccaacaccagggacgtcccgcaccagccggtgatcaacgcgtttgccgaacgcgcgaag
cagggcaccaccaaggtcgtgcaggccagcggcgcggattccgagctcggccgcaagcgc
accgccgtccagcagctgattgcggcttatcgcaatgtcggcgcccgctgggccgacctg
gaccccctcaagcgcgccgagcgcccggccattccggaactcgaaccctcgttctacggc
ttcaccgatgccgacctcgagacggtgttcaacaccagcaacaccttcttcggcaaggag
accatgtcgctgcgcgacctgctcaatgccttgcgcgaaacgtactgcggcaccatcggc
gccgagtacatgtacaccaccgaccagaaccacaagcgctggtggcagcagaagctcgaa
agcgcccgcactaacccgcagctcaatgcggaccagaagaagcacgtgctcaaccgcctg
accgcggccgaaggcctcgagcgcttcctgcacaccaagtacgtcggccagaagcgcttc
tcgctcgaaggcggcgaaagcttcatcgtctcgatggacgagctgatcaaccaggccggc
atcaagggcgtgcaggaaatcgtgatcggcatggcccaccgcggccgcctcaacgtgctg
gtcaattcgctcggcaagatgccggccgacctgttcgctgagttcgaccacaccgcgcct
gaagacctgccgagcggcgacgtcaaataccaccagggcttcagctcggacgtgaccacg
cccggcggcccggtgcacctgagcctggcattcaatccctcgcacctcgagatcgtgaac
ccggtggtcgaaggctcggtgcgcgcccgcatggaccgccgcgccgacccgcagggcaag
caggtgctgcccgtgctggtgcacggcgacgccgccttcgcgggccagggcgtcgtgatg
gaaacgctggcgctggccgaaacccgtggctacttcacgggcggcacggtgcacatcgtc
atcaacaaccagatcggcttcaccaccagcgacccgcgcgacagccgctcgacgctgtac
tgctcggacatcgtcaagatgatcgaagcaccggtgctgcacgtgaacggcgacgatccc
gaagccgtggtgctcgccacccagctcgccctcgaattccgcatggagttccagaaggac
gtagtggtcgacatcatctgcttccgcaagctgggccacaacgagcaggacaccccctcg
ctcacgcagccgctcatgtacaagaagatcgcccagcaccccggcacgcgcaagctgtac
gccgacaagctggcgacgcagggcctgggcgccacgctcggcgacgacatggtcaaggcc
cagcgcgccgccttcgacgaaggccgcaacacggtcgacccggtgctcacgaacttcaag
agcaagtacgccgtcgactggaatccctacctcaacaagaagtggaccgacgccggcgac
accgccattccgtccagcgagtggaagcgcctggccgagaagatcaccacggtgccggcc
ggcttcacggtgcacccgctcgtgaagaaggtgctggacgaccgcgccgccatgggccgc
ggcgacgtcaacgtcgactggggcatgggcgagcacatggcctttgcgtcgctggtggcc
agcggctacccggtgcgcctgtcgggcgaagactcgggccgcggcacgttcacgcaccgc
cacgccgtgctgcacgaccagaaccgcgagaagttcgacgaaggcacctacacgccgctg
cagaacgtggccgagaaccaggcaccgttcgtcgtcatcgactcgatcctgtcggaagaa
gcggtgctcgcgttcgaatacggctatgcctcgaacgacccgaacacgctcgtgatctgg
gaagcccagttcggcgacttcgtgaacggtgcgcaagtggtgatcgaccagttcatcgcc
tcgggcgaagtgaagtggggccgcgtcaacggcctcacgatgatgctgccgcacggctac
gaaggccagggccccgagcacagctcggcccgcctggagcgcttcatgcagctgagcgcc
gacaccaacatgcaggtggtgcagcccaccacggccagccagatcttccacgtgctgcgc
cgccagatggtgcgcaacctgcgcaagcctttgatcatcatgacgccgaagtcgctgctg
cgtaacaaggacgcgacctcgccgctgtccgagttcaccaagggcggcttccagacggtc
atccccgacagcaagggcctgaaggccgagaaggtcaagcgcctgatcgcctgctcgggc
aaggtctactacgacctggccaagaagcgcgaagagcagggcaccgacgacgtggcgatc
atccgcgtcgagcagctctatccgttcccgcacaaggccttcgcggccgagatcaagaag
tacccgaacctcgccgacgtggtgtggtgccaggacgagccgcagaaccagggcgcctgg
ttcttcgtgcagcactacatccacgagaacatgcaggaaggccagaagctcggctactcc
ggccgtgccgcttcggcatcgcctgcagtcggctactcgcacctgcaccaggaacagcag
aaggcgctggtcgatggcgcatttggcaagctcaagggcttcgtgctgaccaagtaa
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