Variovorax paradoxus S110: Vapar_2203
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Entry
Vapar_2203 CDS
T00916
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00270
Cysteine and methionine metabolism
vap00450
Selenocompound metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Vapar_2203
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Vapar_2203
Enzymes [BR:
vap01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
Vapar_2203
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Motif
Pfam:
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ACS18838
UniProt:
C5CXI2
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Position
1:2353332..2354525
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AA seq
397 aa
AA seq
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MSKPSTTLIHHPYTPPANFAAPQPGIYKASTVFFADVAAMRARDWKTKAGYTYGLHGTPT
TFTLEERLATLEGGTECLLVPSGLAAISLVSFAFLKSGDEVLIPDNAYGPNKALATGELA
NFGITHRLYDAMNPADLAAKLSDRTRLVWLEAAGSVTMEFPDLPALVKACRARGVMTALD
NTWGAGLAFAPFDFNGSGQGVDISVHALTKYPSGGGDVLMGSVVTRDERLHRALKLTHMR
TGFGVGVGDVETLLRSLPSIGLRYAAHDRSARELARWLAGREEIAQVLHPALEGSPGHAN
WRALCGGTDLAAGLFSVVFDESFSTEQVDRFCDSLNLFRLGYSWGGPVSLVVPYDIGLMR
DASVARWPHKGTLVRFSVGLEDVEDLRADLQQALARM
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccttccacgaccctgatccaccacccctacacgccgcccgccaacttcgcc
gcgccgcagccgggcatctacaaggcatcgaccgtgttctttgccgacgtggccgcgatg
cgcgcgcgcgactggaagaccaaggccggctacacctacggcctgcatggcacgccaacc
accttcacgctcgaggagcgcctggccacgctcgaaggcggcaccgagtgcctgctggtg
ccgagcggcctggccgccatttcgctggtttccttcgccttcctgaagagcggcgacgaa
gtgctgattcccgacaacgcctacggccccaacaaggcgctggcgaccggcgagctggcc
aacttcggcatcacgcaccgcctgtacgacgcgatgaatcctgccgacctggccgccaag
ctctcggaccgcacgcggctggtgtggctcgaggcggcgggctcggtgacgatggagttt
ccggacctgccggcgctcgtgaaagcctgccgtgcgcgcggcgtgatgacggcgctggac
aacacctggggcgcgggcctcgcgttcgcgcccttcgatttcaacggcagcgggcagggc
gtggacatctcggtgcatgcgctcaccaaatatccgagcggcggcggcgacgtgctgatg
ggcagcgtcgtcacgcgcgacgagcggctgcaccgcgcgctcaagctcacgcacatgcgc
acgggcttcggcgtgggcgtcggcgacgtggaaacgctgctgcggtcgctgccgagcatc
gggctgcgctatgccgcgcacgaccgttcggcgcgcgagctggcgcgctggcttgccggc
cgcgaagagatcgcgcaggtgctccacccggcactcgaaggatcgcccggccatgccaac
tggcgtgcgctgtgcggcggcacggacctggcagcgggcctgttctcggtcgtgttcgac
gaaagcttcagcaccgagcaggtcgaccgcttctgcgacagcctgaacctgttccgcctc
ggctattcgtggggcggcccggtgagcctggtggtgccctacgacatcggcctgatgcgc
gatgccagcgtggcgcgctggccgcacaagggcacgctggtgcgcttctcggtcgggctg
gaagatgtggaagacctgcgggccgacctgcagcaggcgctcgcgcggatgtaa
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