Variovorax paradoxus S110: Vapar_4831
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Entry
Vapar_4831 CDS
T00916
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vap
Variovorax paradoxus S110
Pathway
vap01501
beta-Lactam resistance
vap01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Vapar_4831
01503 Cationic antimicrobial peptide (CAMP) resistance
Vapar_4831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vap03036
]
Vapar_4831
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_4831
01504 Antimicrobial resistance genes [BR:
vap01504
]
Vapar_4831
Chromosome and associated proteins [BR:
vap03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Vapar_4831
Transporters [BR:
vap02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Vapar_4831
Antimicrobial resistance genes [BR:
vap01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Vapar_4831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
Biotin_lipoyl_2
HlyD_3
DUF1344
Motif
Other DBs
NCBI-ProteinID:
ACS21435
UniProt:
C5CN72
LinkDB
All DBs
Position
1:5148752..5150026
Genome browser
AA seq
424 aa
AA seq
DB search
MPLLHVSRQSSFSPRLAIVAAAVVLALAACSKGDAPAGPGGGAGGGGARPAPEVGVVVAA
PTDVGLVTELPGRLEASRVAQVRARASGILLKREFREGSDVKAGQLLFRIDPAPLVAAAQ
NAQATLARAEANAVQAKALADRYKPLVEANAVSKQEYATAVASQKTAEADVAAGRAAVQT
AKINLGYADVTSPIAGRIGRALVTEGALVGQGDATELAVVQQINPMYVNFTQSASDVLKL
RRALAAGQYKRASGEEAASVNVVLEDGTDYALPGKLLFSDLTVDSTTGQVTLRAEVPNPK
GELLPGLYVRVRLEQAQATNAITIPQQAVTRTQQGDTVSVVSADGKISQRTVKISAAKDN
QWVVLDGLKAGEQVMVDGFQKLQMMPPGTPVKAVPWKKPDPSAAPAPAAPAPGAAPAAAP
AEKK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcctgcatgtttcgcgtcaatcgtcgttctcgccgcgcctcgcgatcgtggcc
gctgctgtggtgttggcgctcgcggcctgttccaagggcgatgcgccggccggcccgggt
ggcggtgccggcggcggcggtgcccgccctgcccctgaggtgggcgtggtggttgccgcg
cccaccgacgtgggcctggtgaccgaactgccgggccggctcgaagcctcgcgcgtggcg
caggttcgcgcccgcgcctcgggcatcctgctgaagcgcgagttccgcgaaggcagcgac
gtgaaggccggccagctgctgttccgcatcgacccggcaccgctggtggccgccgcgcaa
aacgcgcaggccacgctggcccgtgccgaagccaacgcggtgcaggccaaggcactggcc
gaccgctacaagccgctggtcgaggccaacgcggtgagcaagcaggaatacgcgacggcc
gtggcttcgcaaaagacggccgaggccgacgtggccgcgggccgcgccgcagtgcagacg
gccaagatcaacctgggctatgccgacgtgacttcgcccattgccggccgcatcggccgc
gcgctggtgaccgaaggcgcgctggtgggccagggcgacgcgaccgaactggccgtggtg
cagcagattaacccgatgtacgtgaacttcacgcagtcggcgtccgacgtgctgaagctg
cgccgcgcactggccgccggccagtacaagcgcgcgagcggcgaagaagccgccagcgtg
aacgtggtgctggaagacggcaccgactacgccctgcccggcaagctgctgttctccgac
ctgacggtggattcgaccaccggccaggtcacgctgcgcgccgaggtgcccaacccgaag
ggcgagctgctgcccggcctgtacgtgcgcgtgcggctggagcaggcgcaggccaccaac
gcgatcacgattccccagcaggcggtcacgcgcacgcagcagggcgacacggtgtcggtg
gtgagcgccgacggcaagatcagccagcgcacggtgaagatcagcgccgccaaggacaac
cagtgggtggtgctcgatggcctgaaggcgggcgagcaggtgatggtcgacggcttccag
aagctgcagatgatgccgcccggcacgccggtgaaggcggtgccatggaagaagccggac
ccgagtgcggctccggcgcctgcggcacccgctcctggtgccgcccccgcggccgcaccg
gccgagaagaagtaa
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