Variovorax paradoxus S110: Vapar_4832
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Entry
Vapar_4832 CDS
T00916
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
vap
Variovorax paradoxus S110
Pathway
vap01501
beta-Lactam resistance
vap01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Vapar_4832
01503 Cationic antimicrobial peptide (CAMP) resistance
Vapar_4832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_4832
01504 Antimicrobial resistance genes [BR:
vap01504
]
Vapar_4832
Transporters [BR:
vap02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Vapar_4832
Antimicrobial resistance genes [BR:
vap01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Vapar_4832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ACS21436
UniProt:
C5CN73
LinkDB
All DBs
Position
1:5150043..5153207
Genome browser
AA seq
1054 aa
AA seq
DB search
MAKFFIDRPIFAWVIALFILVGGSVAITQLPISQYPPVAPPAIVINVAYPGASAQTLEDS
VLSVIEREMNGSPGLIYMESVAQADGTGTITISFEAGTNPDLAQVDVQNRLSRATPRLPA
AVTQQGVRVDKSRNNFLMFVMLSSDNPNFDPVALGDYAARNVVPELQRVVGVGQAQLFGS
ENAMRIWIDPNKLQGYNLSATDVNNAIRAQNAQVSSGTIGDLPNIPGQAIAATVVVNGQL
ANVDQFKDIVLRANTDGSTVRLKDVARVELGGQSYATSARLNGVPAVGIGVQPTPNGNAL
QSAKAIRAKMAELERFFPQGVKWNIPYDSSRFVQISITEVVKTLLEAIALVFIVMFLFLQ
NWRYTIIPTIVVPIALLGTFAMLLAMGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM
SEEGLSPLEATRKAMKQISGAIIGVTVVLISVFVPLAFFAGSTGNIYRQFSAVMVTSIAF
SAFMALSLTPALCATLLKPVEAGHHHEKTGFFGWFNRGFTRTAKGYESVVARILRRAARY
LVIYVAIIGAVVFTYLRLPSSFLPAEDQGNIIVNVQLPPGATQERALSVMQQVEGFILKQ
PEVQSIVGVMGFSFSGQGQNAGLAFVTLKDWEERKDPAHSASALAGRAFGALSGIRDAFI
YPLSPPPIPELGNASGFSFRLQDRSGAGHEALINARNQLLGMAGQSKILSQVRPDGLEDA
PQLQIDIDRDKANALGVTFDAINATLSTGLGSSYINDFPNRGRLQRVVVQADAPARMQPD
DLLRLNASNTKGQPVPLSAFATTKWVKGATQTVRYNGYPAIRISGDAAQGYSTGAAMAEM
EKLAGQLPQGFGFEWTGQSREEKLAGSQAIVLYGFAILAVFLCLAALYESWSIPLSVILV
VPLGVLGVLLATMLRAYSNDVYFQVGLITIIGLSAKNAILIIEFAKDLQAQGKGIVESAL
AAAHLRFRPIIMTSLAFGLGVVPLVLASGAGSASQRAIGTGVLGGMVTGTALAVIFVPVF
FVVVRSLFKGSARQHEADKRHAEAAGITEEKAHD
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggccaaattctttatcgaccgaccgatcttcgcctgggtgatcgcgctgttcatcctg
gtgggcggcagtgtcgccattacccagctgccgatctcgcagtacccgccggtggctccg
ccggccatcgtgatcaacgttgcctacccgggcgcctcggcccagacgctggaggacagc
gtgctgtccgtgatcgagcgcgagatgaacggctcgccaggcctgatctacatggaatcg
gtggcccaggccgacggcacgggcaccatcaccatcagcttcgaggcgggcaccaacccc
gacctcgcgcaggtggacgtgcagaaccggctctcccgcgccacgccgcgcctgccggcc
gcggtcacgcagcagggtgtgcgcgtggacaagtcgcgcaacaacttcctgatgttcgtg
atgctgtcctcggacaacccgaacttcgacccggtggcgctcggcgactatgccgcgcgc
aacgtggtgcccgaactgcagcgcgtggtcggcgtgggccaggcccagctgttcggctcc
gagaacgcgatgcgcatctggatcgatccgaacaagctgcagggctacaacctgtcggcc
acggacgtgaacaacgcgatccgcgcgcagaacgcgcaggtgtcctcgggcaccatcggc
gacctgcccaacatccccggccaggccattgcggccacggtggtggtgaacggccagctg
gccaacgtcgaccagttcaaggacatcgtgctgcgcgccaacaccgacggctcgaccgtg
cggctgaaggacgtggcgcgggtggagctgggcggccagtcgtatgccacctcggcgcgc
ctgaacggcgtgcccgcggtgggcattggcgtgcagcccacgcccaacggcaacgcgctg
cagtcggccaaggcgatccgcgccaagatggcggagctggagcgcttcttcccgcagggc
gtgaagtggaacattccgtacgacagctcgcgcttcgtgcagatttccatcaccgaagtg
gtcaagacgctgctggaagccattgcgctggtgttcatcgtgatgttcctgttcctgcag
aactggcgctacacgatcatcccgaccatcgtggtgccaattgcattgctgggcaccttt
gccatgctgctggccatgggcttctcgatcaacgtgctgaccatgttcggcatggtgctg
gtgatcggcatcgtggtggacgacgccatcgtggtggtggagaacgtcgagcgcatcatg
agcgaagaggggctgtcgccgctcgaagccacgcgcaaggccatgaagcagatctcgggc
gccatcatcggcgtgacggtggtgctgatctcggtgttcgtgccgctggcgttctttgcg
ggctccacgggcaacatctaccgccagttctcggcggtgatggtgacctcgatcgccttc
tcggccttcatggcgctgtcgctcacgccggcgctgtgcgccacgctgctcaagccggtg
gaagcgggccaccaccacgagaagaccggcttcttcggctggttcaaccgcggcttcacg
cgcacggccaagggctatgagagcgtggtcgcgcgcatcctgcggcgcgccgcgcgctac
ctggtcatctacgtggcgatcatcggcgcggtggtgttcacctacctgcggctgccgagc
tcgttcctgccggcggaagaccagggcaacatcatcgtgaacgtgcagctgcccccgggt
gccacgcaggagcgtgcgctgtcggtcatgcagcaggtcgagggcttcatcctgaagcag
cccgaagtgcagagcatcgtgggcgtgatgggcttcagcttctcgggccaggggcagaac
gcgggccttgccttcgtgacgctgaaggactgggaggaacgcaaggacccggcccattcg
gccagcgcgctggcgggccgtgcctttggtgcgctctcgggcattcgcgatgcgttcatc
tacccgctgagcccgccgcccattcctgaactgggcaatgcgagcggcttcagcttccgg
ctgcaggaccgctcgggcgcgggccacgaggcgctgatcaatgcgcgcaaccagctgctg
ggcatggccgggcagagcaagatcctgtcgcaggtgcgccccgacggcctggaagacgcg
ccgcagctgcagatcgacatcgaccgcgacaaggcgaatgccctgggcgtgaccttcgat
gcgatcaacgccacgctgtcgacgggcctgggttcgagctacatcaacgactttccgaac
cgcggccgcctgcagcgcgtggtggtgcaggccgatgcgccggcgcgcatgcagcctgac
gacctgctgcgcctgaacgccagcaacaccaagggccagccggtgccgctgtcggcgttt
gcgaccaccaagtgggtcaagggcgcgacgcagacggtgcgctacaacggctacccggcg
atccgcatcagcggcgacgccgcgcagggctacagcacgggcgccgcgatggccgagatg
gaaaagctcgccgggcagctgccgcagggctttggctttgaatggacgggccagtcgcgc
gaagaaaagctcgcgggctcgcaggcgatcgtgctgtacggctttgcgattctggcggtg
ttcctgtgcctggccgcgctgtacgagagctggtcgattccgctgtcggtgatcctggtg
gtgccgctgggcgtgctgggggtgctgctggcgaccatgctgcgcgcctactcgaacgac
gtgtacttccaggtggggctgatcaccatcatcggcctgtcggcgaagaacgcgatcctg
atcatcgagtttgcgaaggacctgcaggcgcagggcaagggcatcgtcgaatcggcattg
gccgcggcccacctgcggttccgcccgatcatcatgacctcgctggccttcggcctgggc
gtggtgccgctggtgcttgcctcgggggccggctcggccagccagcgcgccattggcacg
ggcgtgctcggcggcatggtgacgggtacggcgctggccgtgatcttcgtgccggtgttc
ttcgtggtggtgcgcagcctgttcaagggcagtgcgcgccagcatgaagccgacaagcgg
cacgcggaagcagccggcatcacggaagaaaaagcacatgactaa
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