Variovorax paradoxus S110: Vapar_5149
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Entry
Vapar_5149 CDS
T00916
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00010
Glycolysis / Gluconeogenesis
vap00020
Citrate cycle (TCA cycle)
vap00620
Pyruvate metabolism
vap00785
Lipoic acid metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01210
2-Oxocarboxylic acid metabolism
Module
vap_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Vapar_5149
00020 Citrate cycle (TCA cycle)
Vapar_5149
00620 Pyruvate metabolism
Vapar_5149
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Vapar_5149
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Vapar_5149
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GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
ACS21751
UniProt:
C5CR75
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Position
1:complement(5463388..5466054)
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AA seq
888 aa
AA seq
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MNAPISADQMRALLPDAPLSHDPDPAETAEWREAFLALAQAHGPQRARQMLAELARLARQ
QRIGWQPELATPYVNTIAVEDQPPFPGDLAVEERLASLMRWNALAMVARANQAYGELGGH
IASYASAADLFETGFNHFFHARKDTGEGTHRGDLVFFQPHSAPGVYARAYLEGRLTEEDL
KHYRQELTAPAFTEGRGARGLSSYPHPYLMPDFWQFPTGSMGIGPISSIYHARFMRYLTH
RNLLNCEGRKVWGVFGDGEMDEPESMSALTLAAREKLDNLVWVVNCNLQRLDGPVRGNGR
IIDELEKLFAGAGWNVIKLVWGSDWDGLFAQDVSGALARVFAETVDGQMQTFAAKDGRFN
RDNFFGQNPELARLAEGMTDEQIDRLKRGGHDLVKIHAAYAAAAAHKGRPTVILAHTKKG
YGMGSAAQGKMTTHSHKKMGDVDLIEFRDRFSLPLTDAQAIAMDFYRPPEDSAEMKYLRS
HREALGGAMPRRETACELVPKPDIASYAQFATAAAGKEMSTTMAFVRMLGNLLKDKALGP
RIVPIVADEARTFGMANLFKQVGIYSSVGQRYAPEDIGSVLSYREATDGQILEEGISEAG
AIASWTAAATSYSVHGLAMLPFYIYYSMFGFQRVGDAIWAAADQRARGFLLGATSGRTTL
GGEGLQHQDGTSHLVAATIPNCKAYDPAFAGEMAVIVDAGIREMMVEQKDVFYYVTLMNE
NYAQPDVPPGAEAGILRGCYRFGVYAPTSGKAKKKVTLMGSGAILTEVVKAAQRLADEGI
EAEVFSVTSWSELARDGVACERRAIAGEKEAGVPFVAQQLGAGKAPIIAATDYVRAVPES
VRAFLPEGRRYLTLGTDGFGRSDTRAALRSFFGIDAASIANAARHALG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccatttccgccgaccagatgcgcgcgctgctgcccgacgcgccgctctcg
cacgaccccgaccccgccgagaccgccgaatggcgcgaggccttcctggcactggcccag
gcgcacggcccgcagcgcgcacggcagatgctggcggagctcgcccgcctcgcgcggcag
cagcgcatcggctggcagcccgagctggcgacgccgtacgtcaacaccatcgcggtggaa
gaccagccgccgttcccgggcgacctggccgtcgaggagcggctggcttcgctgatgcgc
tggaatgcgcttgcgatggtggcgcgcgcgaaccaggcctatggcgagctcggcggccac
atcgcgagctatgcgagcgcggccgatctgttcgagacggggttcaatcatttcttccat
gcgcgcaaggacacgggcgaaggcacacaccgcggcgacctcgtgttcttccagccgcac
agcgcacccggcgtctatgcgcgcgcctacctcgaaggccgcctgaccgaagaagacctc
aagcactaccgccaggaactcaccgcccccgccttcaccgaaggccgcggcgcgcgcggc
ctcagcagctacccgcatccctatctgatgccggacttctggcagttcccgaccggctcg
atgggcatcggcccgatcagctcgatctaccacgcgcgcttcatgcgctacctcacgcac
cgcaacctcttgaactgcgaaggccgcaaggtctggggcgtgttcggcgacggcgagatg
gacgagcccgaatcgatgagcgccctcacgctggccgcgcgcgaaaaactcgacaacctc
gtgtgggtcgtcaactgcaacctgcagcgcctcgatggcccggtgcgcggcaacggccgc
atcatcgacgagctcgagaagctctttgccggggcaggatggaacgtcatcaagctggtc
tggggcagcgactgggacggcctcttcgcgcaggacgtgagcggtgcgctggcgcgcgtg
ttcgccgaaaccgtcgacggccagatgcagaccttcgcggccaaggacggccgcttcaac
cgcgacaacttcttcggccagaaccccgagctcgcgcgcctggccgaaggcatgaccgac
gagcagatcgaccgcctgaagcgcggcggccacgacctcgtgaagatccatgccgcctat
gccgccgcggccgcgcacaagggccggcccaccgtgatccttgcccacaccaagaagggc
tacggcatgggcagcgccgcgcagggcaagatgaccacgcactcgcacaagaagatgggc
gacgtcgacctcatcgaattccgtgaccgcttcagcctgccgctgaccgatgcgcaggcc
attgcgatggacttctaccgtccgcccgaagacagcgccgagatgaagtacctgcgcagc
caccgcgaagcgctcggcggcgccatgccgcgccgcgagacggcctgcgagttggtgccc
aagcccgacatcgcaagctatgcgcagtttgcgacggcggctgccggcaaggaaatgagc
accaccatggccttcgtgcgcatgctgggcaacctgctcaaggacaaggcgctgggcccg
cgcatcgtgcccatcgtggccgacgaagcgcgcaccttcggcatggccaacctgttcaag
caggtcggcatctattcgagcgtgggccagcgctatgcgcccgaggacatcggctccgtg
ctgagctaccgcgaagccaccgacggccagatcctcgaggaaggcatcagcgaagccggc
gccatcgcaagctggaccgcagccgccaccagctacagcgtgcacggcctcgcgatgctg
cccttctacatctactactcgatgttcggcttccagcgcgtgggcgatgcgatctgggcc
gcggccgaccagcgcgcgcgcggcttcctgctgggcgccacctccgggcgtaccacgctc
ggcggcgaaggcctgcagcaccaggacggcacgagccacctcgtggccgcgaccattccc
aactgcaaggcctacgacccggcctttgcgggcgagatggcggtgatcgtcgatgccggc
atccgcgagatgatggtcgagcagaaggacgtgttctattacgtcacgctcatgaacgag
aactacgcgcagcccgatgtgccgccaggcgcggaggccggcatcctgcgcggctgctat
cgcttcggcgtgtatgcgccaacctcgggcaaggcgaagaagaaggtcacgctgatggga
tcgggcgcgatcctcaccgaggtggtcaaggccgcgcagcggctggccgatgaaggcatc
gaggccgaggtgttcagcgtcacgagctggagcgagctcgcgcgcgacggcgtggcttgc
gagcggcgcgcgattgcgggcgagaaggaagcgggggtgccgttcgtcgcgcagcagctc
ggcgccggcaaggcgccgatcatcgccgccaccgactacgtgcgcgccgtgcccgagagc
gtgcgcgccttcctgcccgaaggccgccgctacctcacgctcggcaccgacggcttcggc
cgcagcgacacgcgcgcggcgctgcgcagcttcttcgggatagatgcggcgagcatcgcg
aacgcggcgcgccacgcgctcggctga
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