Variovorax paradoxus S110: Vapar_5334
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Entry
Vapar_5334 CDS
T00916
Name
(GenBank) 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00010
Glycolysis / Gluconeogenesis
vap00020
Citrate cycle (TCA cycle)
vap00620
Pyruvate metabolism
vap00785
Lipoic acid metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01210
2-Oxocarboxylic acid metabolism
Module
vap_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Vapar_5334
00020 Citrate cycle (TCA cycle)
Vapar_5334
00620 Pyruvate metabolism
Vapar_5334
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Vapar_5334
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Vapar_5334
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
ACS21936
UniProt:
C5CZC8
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All DBs
Position
2:33261..35933
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AA seq
890 aa
AA seq
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MSTMGDLDPTETGEWVDALGAVQQHRGSERANFLLNRLVDEGRRDGVYVPRSLNTAYRNT
IPPEKEEKSPGNREIEHRLRSIIRWNAMAIILRANKDSSELGGHIASFQSAATLYDIGFG
HFWHAATDTHGGDLLFIQGHSSPGIYARAFLEGRLSEQQLLNYRQESEGNGIPSYPHPWL
MPDFWQFPTVSMGLGPLMAIYQARFLKYLHGRGLADTAPRKVWAFMGDGEMDEPESLGAI
SLAGRESLDNLVFVINCNLQRLDGPVRGNGKIVQELESVFRGAGWNVIKVLWGSGWDALL
AKDKSGKLLQRMEECVDGEYQDFKSKSGAYVREHFFGKYDETRALVAEMSDDEIWGLTRG
GHDPEKVFAAYAAAVRHKGQPTLILPKTVKGYGMGESGEGQMIAHQAKKMTQDALRGFRN
RFQIPVSDEELPDVPFIRLAEDSPEMKYLRERRAALGGYLPQRRRKSTALEIPPLATFER
LLKDTGEREISTTMAFVQMLGTLVRDKQIGKHVVPIVPDESRTFGMEGMFRQLGIWSSLG
QLYKPQDADQLMYYRESKDGQVLQEGINEGGAMSSWIVAATSYSTNNVPMIPFYIYYSMF
GLQRVGDLAWLAGDMRARGFLLGGTAGRTTLNGEGLQHEDGHSHILAGTIPNCVSYDPTF
AYEVVAIVRDGMRRMYAEQEDVYYYITLMNENYPHPGMPEGSEAGILKGLYQLSDGGKTP
NKGHRVQLVGSGTILREVMFAAELLKNDFGIAADVWSATSYNELRRDGMAAERWSRLHPT
EPARKSHVEQCLEGHEGPVIAATDYMRNYADQVREYVQAAGRRYTVLGTDGFGRSDYRRK
LRRFFEVDRWHVAVAALKALADDGVIKHTVVAEAIEKYGLDAERAAPWTV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgggtgaccttgaccccacggaaaccggcgaatgggtcgatgcgctcggc
gcggtccaacagcaccgcggcagcgagcgcgcgaactttctgctgaatcgcctcgtcgac
gagggccgccgcgacggcgtgtacgtgccgcgctcgctgaacacggcctaccgaaacacc
atcccgcccgagaaggaagaaaagtctcccggcaaccgcgagatcgagcaccgcctgcgc
tcgatcatccgctggaacgcgatggcgatcatcctgcgcgccaacaaggattcgtccgaa
ctcggcggccacatcgcgagcttccagtcggcggccacgctctacgacatcggcttcggc
cacttctggcatgccgccaccgacacgcatggcggcgacctgctgttcatccagggccac
agctcgcccggcatctacgcccgcgcttttctcgaaggccgcctgagcgagcagcagctg
ctcaattaccggcaggagtccgagggcaacggcatcccgtcgtacccgcacccgtggctc
atgcccgacttctggcagtttcccaccgtgtcgatgggcctgggcccattgatggcgatc
taccaggcgcgcttcctcaagtacctgcatggccggggtcttgccgacacggcgccgcgc
aaggtctgggccttcatgggcgacggcgagatggacgagcccgagtcgctcggcgccatc
tcgctcgcgggccgcgagagcctggacaacctcgtgttcgtcatcaactgcaacctgcag
cgcctcgacggcccggtgcgcggcaacggcaagatcgtgcaggaactcgagagcgtgttc
cgcggggccggatggaacgtcatcaaggtgctctggggcagcggttgggacgcgctgctc
gccaaggacaagagcggcaagctcttgcagcgcatggaagagtgcgtggacggcgaatac
caggacttcaagagcaagagcggcgcctatgtgcgcgagcatttcttcggcaagtacgac
gagacccgcgcgctggtcgcagagatgagcgacgacgagatctggggcctcacgcgcggg
ggccatgaccccgagaaggtgttcgccgcctatgccgcggccgtcaggcacaagggccag
cccacgctgatcctgcccaagacggtgaagggctacggcatgggcgaatcgggcgagggc
cagatgatcgcgcaccaggccaagaagatgacgcaggacgcgctacgcggctttcgcaac
cgcttccagatccctgtgtccgacgaagagctgcccgacgtgcccttcatccggctcgcc
gaggacagccccgagatgaagtacctgcgcgagcgccgcgccgcgctcggcggctacctg
ccgcagcgccgccgcaagtcgaccgcgctcgagattccgccgctggccaccttcgagcgc
ctgctcaaggacaccggcgagcgcgagatctcgaccaccatggccttcgtgcagatgctc
ggcaccttggtgcgcgacaagcagatcggcaagcacgtggtgccgatcgtgcccgacgag
tcgcgcaccttcggcatggaaggcatgttccgccagctcggcatctggtcatcgctcggc
cagctgtacaagccgcaggacgccgaccagctcatgtactaccgcgagtcgaaggacggc
caggtgctgcaggaaggcatcaacgagggcggtgcgatgtccagctggatcgtcgcggcc
acctcatacagcacgaacaacgtgccgatgattcctttctacatctactactcgatgttc
ggcctgcagcgcgtgggcgacctggcctggctggccggcgacatgcgggcgcgcggtttc
ctgctgggcggcactgccgggcgcaccacgctcaacggcgagggcctgcagcacgaggac
ggccacagccacatcctggccggcaccattcccaactgcgtctcgtacgacccgaccttc
gcctacgaggtggtggccatcgtgcgcgacggcatgcgccgcatgtacgccgagcaggag
gacgtgtattactacatcaccctcatgaacgagaactacccgcaccccggcatgcccgag
ggcagcgaggccggcattctcaaggggctctaccaactcagcgacggcggcaagacaccc
aataagggccaccgcgtgcaactcgtgggcagcggcaccatcctgcgcgaggtgatgttc
gcggccgagctgctcaagaacgacttcggcattgccgccgacgtgtggagcgccaccagc
tacaacgagctgcgccgcgacggcatggccgccgagcgctggagccggctgcacccgacc
gagccggcgcgcaagagccacgtcgagcaatgcctcgaaggccacgagggcccggtcatc
gcggccaccgactacatgcgcaactacgccgaccaggtgcgcgagtacgtgcaggccgcg
ggccggcgctacaccgtgctgggcaccgacggcttcggccgcagcgactaccgccgcaag
ctgcgccgcttcttcgaggtcgaccgctggcacgtggccgtggccgcgctcaaggcgctg
gccgacgacggcgtgatcaagcacaccgtggtggccgaggccatcgagaagtacgggctc
gatgccgagcgcgccgccccctggaccgtctga
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