Vibrio aquimaris: FIV01_04210
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Entry
FIV01_04210 CDS
T06969
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vaq
Vibrio aquimaris
Pathway
vaq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIV01_04210 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaq03400
]
FIV01_04210 (nth)
Enzymes [BR:
vaq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FIV01_04210 (nth)
DNA repair and recombination proteins [BR:
vaq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIV01_04210 (nth)
Prokaryotic type
FIV01_04210 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QFT25624
UniProt:
A0A5P9CHB2
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All DBs
Position
complement(890642..891283)
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AA seq
213 aa
AA seq
DB search
MNNEKRVQILERLRENNPNPQTELNWSTPFELLIAVLLSAQATDVSVNKATDKLYPVANT
PQGLFDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLDKHDGQVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAMGKNVDQVEEKLLKVVPKEFKLDVHHWLI
LHGRYTCVARKPRCGSCIIEDLCEFKDKVYPEN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgaaaaacgagtacaaatactggagcgcttacgggaaaacaaccctaatccg
cagactgaattaaattggagtacaccatttgagcttctcatcgcggtacttctctcagcc
caagcgacggatgtgagtgttaataaggcaaccgataaactgtacccagtcgccaatact
ccgcaaggtctttttgacttaggcgttgacggcgtaaaggaatacatcaaaaccataggt
ttgtttaattcaaaagctgaaaacgtgattaagacatgccgtatcctgcttgataagcac
gatggacaagtccccgaagatcgcgctgctcttgaagctctgcccggtgtcggacgcaag
actgcgaatgttgtattgaacacagcctttggttggccaaccatcgctgtcgatactcat
atttttcgcgtctcaaaccgcaccaagtttgccatggggaaaaacgttgaccaagtagaa
gaaaagctacttaaagttgtacctaaagaattcaaactcgacgtacaccactggttaatt
cttcatggcagatacacatgcgtggccagaaaaccccgctgtgggagctgcattatagaa
gacttgtgtgagtttaaagataaggtttaccctgagaattag
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