Vigna angularis (adzuki bean): 108323013
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Entry
108323013 CDS
T04660
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor PIF1
KO
K16189
phytochrome-interacting factor
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
var00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108323013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
var03000
]
108323013
Transcription factors [BR:
var03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108323013
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
108323013
NCBI-ProteinID:
XP_052728772
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Position
2:42981734..42987185
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AA seq
504 aa
AA seq
DB search
MDDNNQYPILTPSGLPRQNKPSIAEDDVMELLWHNGQVVMQSQNHRSLRKPMPPPRNSHD
ASAAGPSEAREIRPQLDNFNQHLFMQEGEMASWLHYPIDVDDVPPLDQAFCADFLYSPPT
VNNSTAMQTLATSQLTDHRPMSAPPRPPIPLPRRLEPKTPNFAYFARHNTRAAEESVKAS
AKESTXVDSCETPAATAAAVSRVSETVRNAAEPTEGGAGGPVPSTSAGDGRSTMMCDVTM
ASSPGSSSTSGEPVQVAQAEERKRKGREAEEWDSQSEDVDFESEAKKQARGSTSTKRSRA
AEVHNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAISYLKSLQLQVQMMSMGCG
MVPMMFPGIQQYMPAMGMGVGMGMGMEMGMNRPVMPFPNMLPGSALPAATAAAHLGPRFP
MPPFHMPRVPAPDSSRMQAENQSDKNMVAAGPPDPNHSRLPNFTDPYQQYLGPHQMQFQV
IQNQAMNQPNVGKPSTSRDNPESR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaataaccaataccccattctcacgccttcaggattacctcgccaaaacaaa
ccctctattgcagaggacgacgtcatggagctgctatggcataacggccaggttgtgatg
cagagtcagaaccaccgttctctaagaaaaccgatgccgccgcccagaaactcccacgat
gcctccgccgccggtccctccgaggccagggagattcgaccgcagctcgacaatttcaat
caacatctcttcatgcaagaaggcgaaatggcttcctggctacactatccaatcgacgtc
gacgacgtacctccgttggatcaggctttctgcgccgatttcctctactcaccgcccacc
gttaacaacagcaccgccatgcaaactctcgccacgtctcagcttacagaccaccgcccc
atgtccgcaccgcctcgacctccaattccgctgccgagacggctggaaccgaagacgccg
aacttcgcgtacttcgcgcggcacaacacgagagccgccgaggagagcgtgaaggcatcc
gcgaaggaatccacangggtggattcctgcgagacgccggccgcaacggcagcggcggtt
tcgagagtttcggaaactgtgaggaacgcggcggaaccgacagaaggaggcgccggcggt
ccggtgccttcgacgagtgccggtgacggaaggagcacgatgatgtgcgacgtgactatg
gcatcgtcgccgggcagttcgagtactagcggcgagccagttcaggtggcgcaggcggaa
gagcggaagcggaagggtcgggaggcggaggaatgggattctcagagcgaggatgttgat
tttgaatcggaagcaaagaaacaagctcgaggatcaacatctacaaagagatcacgtgca
gcggaggtccataatctctctgagaggaggcgtcgtgatcggattaatgaaaagatgaga
gctctgcaagaacttatacctcgatgtaataagtcggacaaagcttcaatgttggatgaa
gcaatttcgtacttgaaatcattgcagttacaagtgcagatgatgtccatgggatgtggc
atggtacctatgatgtttcctggaatccagcagtacatgccagcaatggggatgggggtt
ggaatgggtatgggaatggaaatgggaatgaacagacctgtgatgccgtttcccaatatg
ttacctggttctgctttgccagcagcaacagcagcggctcatttgggaccaaggtttcca
atgcctcctttccacatgccgcgtgttcctgctcccgattcttccagaatgcaagcagaa
aatcagtcagataaaaatatggttgcagctggtccacctgatccaaaccactcacgtctc
ccaaacttcacggatccttatcaacaatatcttggtccccaccagatgcagtttcaagta
attcagaatcaggcaatgaaccaaccaaatgttggcaagcccagtaccagtagggataat
ccagaaagccgttag
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