Vigna angularis (adzuki bean): 108324214
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Entry
108324214 CDS
T04660
Name
(RefSeq) ABC transporter I family member 19
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108324214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108324214
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108324214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
AAA_28
AAA
AAA_15
AAA_23
SMC_N
NACHT
AAA_5
AAA_33
AAA_22
AAA_18
AAA_25
AAA_30
SRP54
Zeta_toxin
PduV-EutP
Arf
AAA_24
AAA_16
Rad17
AAA_14
Motif
Other DBs
NCBI-GeneID:
108324214
NCBI-ProteinID:
XP_017412567
UniProt:
A0A8T0KY34
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Position
3:complement(19806693..19810174)
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AA seq
282 aa
AA seq
DB search
MAAAEEDFPGIRVRGMQFSYEAQQPPLFLDFNLNVEPGSRCLLVGANGSGKTTLLKILAG
KHMVGGRDVVRVLNGSAFHDTQLVCSGDLAYLGGSWSKNVGSAGEIPLQGDFSAEHMIFG
VEGADPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLYPYKVLLLDEVTVDLDVV
TRMDLLEFFREECEQREATIVYATHIFDGLEAWATHLAYIQDGELRRAEKISDVNELKSS
TNLLSVVEDWLRAETKGVKKKPVQKNFASSPFFSSRHMAYYR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcagaagaagatttccctggaattcgcgtccgcgggatgcaattttcctat
gaagcgcaacaaccgccgctcttcctcgacttcaacctcaacgtcgagcctggatcgcgg
tgcctcctcgtcggtgccaacggatccggtaagacgactttgctgaagattctagcgggg
aagcatatggttggaggaagagatgttgtgcgcgtgttgaatggttccgcttttcatgac
actcaactcgtctgtagtggagatctcgcttatttgggcggatcctggagcaaaaacgtt
ggctctgctggagaaattccgcttcaaggagacttctctgccgaacatatgatctttgga
gttgagggtgctgacccagataggagagacaagttaattgagctgcttgatatcgatctg
cagtggcgaatgcacaaggtatctgatggccagcggcgtcgagtgcaaatctgtcttggt
cttctttatccatataaggttctcttgcttgatgaagtcactgttgatctggatgttgtg
actcggatggatttgttggaattctttagggaagaatgtgaacagagagaagctacaata
gtatatgcaactcatatttttgatggactagaggcatgggcaactcatttggcatacata
caagatggtgaactgagaagagcagaaaagatatcagatgtcaatgagttgaaatcttcc
actaatctgctatctgttgttgaggactggctccgtgctgaaacaaaaggtgtaaagaag
aaacctgtccaaaagaattttgcgagttctccattcttttcatccagacacatggcctat
tatcgatag
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