Vigna angularis (adzuki bean): 108334284
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Entry
108334284 CDS
T04660
Name
(RefSeq) ATP-dependent helicase rhp16 isoform X2
KO
K15083
DNA repair protein RAD16
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108334284
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
108334284
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
zf-RING_UBOX
ResIII
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-ANAPC11
zf-C2HC_2
RING_XB3-XBAT31
zf-C3HC4_4
Ephrin_rec_like
Herpes_UL4
Motif
Other DBs
NCBI-GeneID:
108334284
NCBI-ProteinID:
XP_017425532
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Position
11:complement(6957078..6964504)
Genome browser
AA seq
921 aa
AA seq
DB search
MELRSRRRLSNPAVSGNEQQPKDDTVVEDETKGQSSNNKDKGVSVMLSDSDVVSGSDSDS
DYEDEELVGGSLLDLNKYPFSSISVSDGEDYGSDSSDGDILLFKKAKVPGSRARRKSMNT
EKGEPSDVVRVVDREYSMISPVLVPSAFKGTKKRKYTKKGSKGDSRPVLLWNAWEEEQEK
WIDQHIAEDFDLDNQSEVMNETAEAPSDLTMPLLRYQREWLAWALKQEHSSSRGGILADE
MGMGKTIQAIALVLAKREFQDSCEPDQSIPCSSNLLPAIKGTLVICPVVAVTQWVSEIDR
FTLKGSTKVLVYHGANRGRSVDRFADYDFVITTYSVVENEYRKHMMPPKERCPYCGKLFL
PSKLMYHQSYFCGPDAVRTEKQSKQAKKKREVTKGKTKECESSKILKGSIKKKGDKMCID
MEDSDAVPVRSDRSFLHAVKWQRIILDEAHYIKSRHCNTAKAVLALDSTYKWALSGTPLQ
NRVGELYSLIRFLQITPYSYYLCKDCDCRILDHSSKECSVCTHSSVRHFCWWNKYVATPI
QSFGNGDSGKRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRKDCLDIKEQDYYE
SLYNESQAQFNTYIEANTLMHNYAHIFDLLTRLRQAVDHPYLVVYSQSSGSRSAVMANNA
TTVEQICGICHEPVEDLVVTSCEHSFCRACLIDYYSTSLGQVSCPACSKLLTVDLTSNKD
PGDQVKTTIKGFRSSSILNRIRLENFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSF
LDLINYSLHKSGVSCVQLNGSMSLNARDAAIRRFTEDPDCKIFLMSLKAGGVALNLTVAS
HVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTI
GGSSDALGKLTEADLRFLFVT
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgttctcgtcgacgcctttcgaatcccgcagtgtctgggaatgagcagcag
cctaaggatgatactgttgtggaagatgaaaccaagggccagagtagcaacaataaagac
aaaggtgtttccgttatgttgtctgattcggatgtagtttctggttccgattccgattcc
gattatgaagatgaagaattggttgggggctcgctgctggacttgaataaatatccattt
tcaagcatcagtgtttctgacggagaagattatggttctgattcatctgatggtgacata
cttttattcaagaaggcaaaggttccggggtccagagcgagaagaaagagtatgaacaca
gaaaaaggagaaccgagtgatgtggtgagggtggtggatcgtgaatattcaatgatttca
ccagtattggttccatctgcttttaagggaactaagaagaggaaatatacaaaaaaagga
agtaaaggagattctcgtccagtgttgttgtggaatgcatgggaagaagagcaagagaaa
tggattgatcagcatatagcagaagattttgacttagataatcagagtgaagtaatgaat
gaaactgctgaggcgccctctgatctgactatgcctttacttagataccagagggaatgg
ttagcctgggctttgaaacaagaacattcttcaagtagaggtggaatacttgcagatgaa
atgggaatggggaagactattcaagcaattgctcttgtccttgccaaacgtgaattccaa
gacagttgtgaaccagatcaatccataccatgttcatccaacctgttgcctgctatcaaa
ggaacacttgtcatatgtccagtggttgctgttactcagtgggtcagtgagattgatcgt
tttactttaaaaggaagcaccaaggtgctggtctatcatggggctaatagagggaggagt
gtggatcgatttgcagattatgattttgtgataactacatactctgttgttgagaatgag
tacaggaagcatatgatgcctcctaaagagagatgcccatattgtggaaaattatttttg
ccaagtaagttgatgtatcatcaaagctatttttgtggacctgatgctgttagaacagaa
aaacaatcaaagcaagctaagaagaaaagggaagttactaaagggaagaccaaggaatgc
gaaagtagcaagattttgaagggttctatcaagaaaaagggagacaaaatgtgcatagat
atggaagattctgatgctgtacctgtacgtagcgataggtcatttctccatgctgttaaa
tggcaaaggatcatattggatgaggcacactatatcaaatctagacactgtaacactgct
aaagcagttcttgctttagattctacctacaaatgggcgttgagtggcactccccttcag
aaccgagttggagagctgtattcgctgatacgattcctgcaaataactccttattcctat
tacttgtgcaaggactgtgattgcaggattcttgatcatagctctaaagaatgttcagtc
tgcactcacagttccgtgcgacatttctgttggtggaataaatatgttgccacaccaatt
caatcttttggaaatggtgattctgggaaaagagctatgatactgcttaaacataaagtt
ttgaagaacatagtattaaggcgcacaaaaataggcagggctgctgatcttgcacttcca
cctagaattgtttcgttgagaaaggattgcctagatattaaagagcaagactattatgaa
tcgttatacaatgaaagtcaggcacaatttaatacatacattgaagcaaatacactgatg
cataattatgctcatatatttgatctcctcacacggctgcgtcaggctgttgatcatcca
taccttgtggtatattctcaaagttcaggttcaagaagtgcagttatggccaacaatgct
actaccgttgaacaaatttgtggtatatgccacgagccagtagaagatcttgttgttacc
tcctgtgagcattcattttgccgtgcatgcttgatagactactactctacttccttgggc
caagtatcatgccctgcttgctccaaattacttacagttgatttaacatccaacaaggat
cctggggatcaggttaaaacaacaattaagggtttcagatcctcgagcattttgaataga
attcgccttgagaactttcagacgagtactaaaatagaggctttgagagaagaaataaga
ttcatggtcgaaagggatggttctgccaaagggattgtttttagccaattcacatcgttc
ttggatcttataaactactctttacacaagtctggagtatcttgtgttcagttgaatgga
agcatgtcattgaatgctagggatgctgccattcgaagatttactgaagatccagattgc
aaaatttttctcatgagcttgaaggctgggggtgttgcactcaatttgacggtagcttca
cacgtcttccttatggacccttggtggaacccggccgtagagcgccaggctcaagacaga
attcaccgaatagggcaatacaaacctataagaattgtgaggtttgtcatcgagaacaca
atcgaggagagaattttgaaactccaagagaagaaagaactcgtgtttgaagggactatc
ggtggttcttctgatgctctggggaaattgacagaggcagacttgagatttttgtttgtt
acctaa
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