Vigna angularis (adzuki bean): 108338955
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Entry
108338955 CDS
T04660
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03420
Nucleotide excision repair
var04120
Ubiquitin mediated proteolysis
var04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108338955
04120 Ubiquitin mediated proteolysis
108338955
09124 Replication and repair
03420 Nucleotide excision repair
108338955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108338955
03400 DNA repair and recombination proteins [BR:
var03400
]
108338955
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
108338955
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108338955
Multi subunit type E3
SCF complex
Ring finger protein
108338955
Cul2 complex
108338955
Cul3 complex
108338955
Cul4 complex
108338955
Cul7 complex
108338955
Cul8 complex
108338955
Cul9 complex
108338955
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108338955
TCR (transcription coupled repair) factors
Cul4-CSA complex
108338955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
108338955
NCBI-ProteinID:
XP_017431531
UniProt:
A0A0L9V5U2
LinkDB
All DBs
Position
5:complement(30095631..30098628)
Genome browser
AA seq
116 aa
AA seq
DB search
MATLDSDVPMIPAGEASSSAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgattccgacgtgccaatgattccggccggcgaggcatcgagcagcgcc
ggaccgtcttccaagaagcccaagcgtttcgagatcaaaaagtggaacgcggtcgcactc
tgggcttgggacatcgttgtcgataactgtgccatctgccggaaccacatcatggatcta
tgcatcgagtgccaagccaaccaggccagcgcaactagcgaagaatgcacagtggcgtgg
ggcgtttgtaaccatgcttttcacttccactgcattagtcgatggctcaagactcgtcaa
gtttgtcctctagataacagtgagtgggagtttcagaaatacgggcactag
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