Vigna angularis (adzuki bean): 108345528
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Entry
108345528 CDS
T04660
Name
(RefSeq) nuclear pore complex protein GP210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108345528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108345528
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108345528
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Big_2
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_16th
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_9th
Invasin_D4
Motif
Other DBs
NCBI-GeneID:
108345528
NCBI-ProteinID:
XP_017439597
LinkDB
All DBs
Position
8:1479241..1513227
Genome browser
AA seq
1949 aa
AA seq
DB search
MTIVALLLSFLVTVTVVVSPSHAASSGPHIADVNLLLPPKMTYPVDYRLQGSDGCFQWSW
DHHDILSVEPQYNSTSKCSTSARIRSISPYSGRKETAVYAADLKTGIVIRCKVFIDNISR
IQIFHNSIKLDLEGLATLRVRAFDNEENVFSSLVGLQFMWSLMPEANRLPHHLVNVPLKD
SPLSDCGGLCGDLDIQIKLEDNGVFSDLFVVKGIEIGHEIVSVRLLETQLKNLADEIVLT
VAEAMSLDPPSPVLVLVGAVIPYTLKVIRGNVPEVVTLPSPHHQWSVSNASVAQVDSKTG
LAYAWNLGMTAVIVEDTRIAGHEQVSSLNVVLPSSLCLYISPLSSSGDPVEGVKSNPLMT
RWYVISGHQYLIQIKVFAQDHPAQEIYITENDDVKVYDNDSDQYWKTFFVSNDIAVKHGW
RNSKILEAYSPGLGKLTASLSYPGGADDKKEIIKAVQEIMVCDKVKFTLDNDSGMILLPW
STGVYQEVELKATGGCAKTVSDFRWLSSDSFTVSVTAFGIVQAKKPGKATIKVLSVYDSL
NYDEVLVEVSIPSSMVVLHNFPVETAVGSYLKAAVTMKAANGSFFYVCDAFNSLIKWKSG
SESFVIVNATQELLYLKTEPNTQLRSSVNGSPCSWTYVFASHPGQAVIQAIFSKEDHHHS
HSPVGLKASLRIAAYLPLIVRQAGDGNQFGGYWIDLAQAENDKQSHGLEELYLVPGTSLD
IALVGGPEQWDKGVDFIETVEVLDQANALAEDGVLVERVSDSFRNLYGVLCQKLGTFKLR
FQRGNLVGDDHPLPSVAQVWLSVMCSIPSSIVLIADEPVNECRIIKAAAQAERSSGRLHD
APVIVANGRTIRVSAVGISDLGEAYANSSSLNLRWELSSCEGLAYWDYGFNIVKSNSWEI
FLALQNESGLCTVRATVTGFAEILGDDTFHGFTETENVLTDAIHLQLVSTLRVDPEYKLI
YFNPDAKVNLTIVGGSCFLEAVTNDSQVVQVIQPPSGFECLQLILSPKGLGTANLNIYDI
GLNPPQRASALVQVADIEWIKIISGKVISMMEGSLQTIDLLAGSTGGNSFDASQFVYMNL
HVHIEDNIIELVDTDDFSSLVGGHVNAPSFKIKGRHLGITTLYVSAVQHLGHVVQSQAIK
VEVYAAPRIHPDNIFLLPGASYVLTMEGGPTLGVRVEYGIENDKIASIDRYSGRLSASSI
GNTTITASVFVNGNTVICEARSILRVGIPSTVMLHTQSEQLGIGRKLPIYPLFPEGTLFS
FYELCKNYQWTIEDEKVLSFKVAETLHGDGIQFTTSARSEVNSYFDENNLGFINVLYGRS
PGKTNVAVSFSCELSTSGSRAQSMFYSSSLSVTVIPDLPLALGIPMTWILPPYYTMTNRL
PSLSESYAQYDSRNRRGTISYSLLRSLEKNDAMQKDAIFIDGDRIKTTKSNNLACIQAKD
RTTGRTEIASCVKVSEVTQIRIASKEVLLNVINLAAGAELDLPTNFYDALGNPFHEAYNA
VPFHAETNYPDVLYVNKTADGKGNVHIKAIRHGNVLVRISISEDLQKSDYVLIRVGAHIY
PQNPVLHIGSPLNLSIKGLSDTVSGQWFTTNRSVVSVDTLSGMAKAIGQGSAQVSFRYGG
SKLQTTITVLKGDYISLLGPKEMLTNVPYPSKGYNFSVKFSESLGAPGENTRILFNCRVD
PPYVGYVKPWLDQESGNSYCLFFPYSPEHLVHSVPKLEGMRPDVSVSISASLENEHISGS
ASALFIGGFSIMEMSKNPLLLNLTPGSNKTAITILGNTDVEIHWHHRDLIMISLIHREDI
GIRGYARYEVQLLKAKRFRDKIRITLPANGQSVEIDVNHEPEETAPSSIAINKAFWGSIL
GCFLLLILSIVIFTRFFEKPERSQQTSSSVTTTTSIAAPITPDRSNPSPVNEMSPRTPQP
FVDYVRRTIDETPYYKREGRRRVNPQNTF
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtggccttgttactgagttttctggtaacggtgacggtggtggtgtcgccg
tcgcacgcggcttccagtggtccccacattgctgacgtcaacttgctcttgccgccaaaa
atgacgtatccagttgattaccggctccaaggaagcgacggctgcttccaatggtcatgg
gatcatcatgacattctgtctgttgagcctcagtataattcaaccagcaagtgctcaact
agtgcaagaataagatccatttccccttacagtgggcggaaggaaactgctgtttatgct
gcagacttgaaaactgggattgtgattcgctgcaaagtctttattgacaacatatcacga
atacagatatttcataattctattaaacttgatttagaggggcttgccacactacgtgtt
cgagcctttgataatgaagaaaacgtattttcttcattagttggcttacagtttatgtgg
agccttatgcctgaagccaatagattacctcatcaccttgttaatgttccactaaaggat
tctccccttagtgattgtgggggattatgtggtgacttagatatacaaataaagcttgaa
gacaatggtgtattttcagatctttttgtagtaaagggaattgagattggtcatgagatt
gtgtcagtgcgtttgcttgagacacagttaaagaatttagctgatgagattgttcttact
gttgctgaagctatgtccctcgatcctccttcaccagttcttgtacttgttggtgcagtc
attccctacacccttaaagtcatccgtggaaatgttcctgaagtggttactttaccctca
ccacatcaccaatggtctgtctcaaatgcttcggttgctcaggtcgactcaaaaacaggg
ttagcatacgcatggaacttgggcatgacagctgttattgttgaagatactaggattgct
ggccatgaacaagtgtcttcattgaatgtggtcctaccatcttctctatgtttgtatata
tcacctttatctagttctggtgatccagtggaaggagtaaaatctaaccctctgatgacc
cgttggtatgttatatctggccatcaatatcttatccagataaaggtttttgcacaggat
catcctgcacaagaaatttatattacagagaatgatgatgttaaggtttatgataatgat
tctgatcaatactggaaaacattttttgtttcaaatgatattgctgttaaacacggctgg
cggaattctaaaatcttggaggcttattcaccaggacttggaaaattgacagcttctttg
agctaccctggtggggctgatgacaaaaaggagattatcaaggctgtgcaagaaataatg
gtttgtgataaagtaaagttcaccttggacaatgatagtggaatgatcttattaccatgg
tcaactggtgtttatcaggaggtggagttaaaggctacaggaggttgtgcaaaaactgtg
agtgacttcagatggctatcttcagactcgttcacagtatctgtaacagcttttggtatt
gtccaggcaaaaaaacctggtaaagctactatcaaagtgttatctgtatatgattcacta
aattatgatgaggtccttgttgaagtctccattccttcttctatggttgtgcttcacaat
tttcctgtagaaactgctgttggatcatatcttaaagctgctgtgacaatgaaagcagca
aatggttcctttttctatgtatgtgatgcctttaattcattgataaagtggaagtctgga
agtgagtcttttgtaattgtcaatgcaactcaggagttgttatacttgaaaactgagcca
aatactcagctccgatcatcagtcaatggttctccctgttcctggacatatgtttttgct
tctcatcctggtcaagctgtgatccaggccattttttccaaagaagatcaccaccacagt
catagtcctgttggactaaaagcatccttacgcattgcggcatatctaccccttattgta
cgtcaggcaggtgatggaaaccaatttggtggttactggattgatttggctcaagcagaa
aatgacaagcagtcacatggtttagaggaattatatcttgtacctggcacaagtttagac
atagcacttgttggtggtcctgaacaatgggacaaaggtgtggatttcattgaaactgtg
gaagttttggatcaagccaatgctctagctgaagatggagttcttgtggaacgtgtatct
gatagcttcaggaatttgtatggagttttatgtcaaaagctgggaacctttaaacttcgt
ttccaacgtgggaatttggttggggatgaccatcctctgccttcagtggctcaagtttgg
ttgtctgtgatgtgtagcattccttcttctattgtacttatagctgatgaaccagtgaat
gaatgcagaataattaaagcagcagctcaagctgaacgtagttcaggtagacttcatgat
gcccctgttattgtggcaaatgggcgcactattcgtgtatctgcagttggtatcagtgat
ttgggagaggcttatgcaaattcatcttctctcaatttgaggtgggaacttagcagttgt
gagggactggcctactgggattatggttttaatatagtgaagtctaacagttgggagata
tttctggccttgcaaaatgaatcaggcttgtgcactgttcgtgctactgttactggcttt
gctgagatcttgggagatgatacatttcacgggtttactgaaacagaaaatgttctgaca
gatgcaattcatttacagcttgtttctacccttagagttgatccagagtacaaattgata
tatttcaatcctgatgcaaaggtaaacctgactattgttggtgggagctgtttcttggaa
gctgttacaaatgattctcaagttgtacaagttattcaaccaccatctggatttgaatgc
ctacaattgattttgtcccctaaaggattagggacagccaatctgaatatatatgatatt
ggactaaatcctccacaaagagcttctgcacttgttcaagttgcagatatagagtggatc
aagatcatatcaggaaaagtgattagcatgatggaaggaagtttgcaaactattgactta
ttggctggtagtactggcggaaatagttttgatgcttctcagtttgtttacatgaatctt
catgtacacattgaagataatataattgagctggtggatactgacgatttctcaagcctt
gttggtggacatgttaatgcaccaagttttaaaataaaagggagacatcttggaattaca
accctttatgtcagtgctgtacaacatttgggacacgtagtacaaagtcaagctattaag
gtggaagtttacgctgccccaagaatacaccctgacaatattttcctactacctggtgca
tcgtatgtgcttaccatggaaggaggcccaactctcggggttcgtgttgagtatggaatt
gaaaatgataaaattgcaagtattgatagatattctggacgactctcggcaagttctatt
gggaacactacaattactgctagtgtctttgtgaatggtaatactgtaatttgtgaagca
cggagtattttaagggtgggaattccgtctactgtcatgttgcatacgcagagtgaacaa
cttgggattggccgaaaattgccaatttatccgttatttcccgagggtactctgttttct
ttctatgagctatgtaaaaattaccagtggaccattgaagatgaaaaggtattgagcttt
aaggtggcagagaccttgcacggggatgggatccagtttactacttcagcaagaagtgaa
gttaatagttattttgatgagaataaccttggctttattaatgtcttgtatggaagatct
ccaggcaagaccaatgttgctgtgtctttctcgtgtgaactttcaacttctgggtcaagg
gctcagtccatgttttacagttcatctttgtcagtaacagtgattcctgatcttccactg
gctttgggaatccccatgacctggattcttcctccctactatacaatgacgaaccgtttg
ccttcattgtcagaatcctatgcacaatatgatagtcgaaatcgcaggggaaccatcagc
tattctttattgagaagtttagagaaaaacgatgctatgcaaaaagatgccatattcatt
gacggggacagaattaaaactaccaaaagtaataatcttgcttgtattcaagctaaagat
cgtactacaggaagaacagagattgcttcttgtgtcaaggtttctgaggtgactcaaatt
agaatagccagtaaggaggttctcctcaatgtgattaaccttgctgctggtgcagaactt
gatcttccaacaaacttttatgatgctttaggaaatcctttccacgaagcctacaatgct
gtgcctttccatgctgaaactaactaccctgatgttctctatgtaaacaaaacagctgat
ggaaaaggcaatgtccatatcaaggcaattcggcatggtaatgttcttgtgcgtatatca
attagtgaagatctgcagaaatcagattatgtgctgattagagtgggtgcccatatatat
ccgcaaaatccagttcttcacataggaagtcctcttaacctaagcataaaaggtttgagt
gatacagtttctggacagtggtttactacaaatagaagtgtagtatccgttgatacacta
tctgggatggccaaagctattgggcaaggttcagcccaagtatctttccgttatggagga
tcaaaactgcaaacaacaattacagtgttgaaaggagattatatttctttgcttggccca
aaggagatgttaactaatgtcccatacccctcgaaaggatacaacttctccgtgaaattc
agtgaatcccttggtgcacctggagaaaacacgagaattttattcaattgtagagtagat
ccaccatatgtggggtacgtgaagccatggctggatcaggaatctggcaattcatattgc
ttatttttcccatactcaccggagcatttggtgcactcagtacctaagttagaaggcatg
aggccagatgtatcagtctccatttctgcttctcttgaaaatgaacacatatctggatct
gcttcagcactttttattggcggattttctataatggagatgagcaagaatccgttgctg
ctgaatctgacaccaggctcaaacaaaactgccattaccatattgggaaatactgatgtt
gaaattcactggcatcatcgagatttgattatgatcagtctcatccacagagaagatatt
ggcattcgtgggtatgcacggtatgaggttcaacttctgaaagccaagagattcagagac
aaaatccgcatcacacttccagctaatggccagagtgtggaaatagacgtcaaccatgaa
cctgaggaaacagcaccatccagcatagccataaataaagccttctggggaagtattctg
ggatgttttctgctgttgattttatcaatcgttatcttcacacgtttcttcgagaaacca
gagagatctcagcaaacaagttcctcggttactacaactacaagcattgcagctcccata
actcctgatagaagcaacccgtctcctgtaaatgaaatgtctccgcgaacacctcaacca
tttgtagactatgtgaggagaaccatcgacgaaactccatattataagcgagaagggaga
agaagggttaatccacagaacacgttttag
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