Veillonella atypica: B7L28_04840 Help Entry B7L28_04840       CDS       T04798                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism vat  Veillonella atypica Pathway vat03030   DNA replication vat03410   Base excision repair vat03420   Nucleotide excision repair vat03430   Mismatch repair Brite KEGG Orthology (KO) [BR:vat00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     B7L28_04840    03410 Base excision repair     B7L28_04840    03420 Nucleotide excision repair     B7L28_04840    03430 Mismatch repair     B7L28_04840  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:vat03032]     B7L28_04840    03400 DNA repair and recombination proteins [BR:vat03400]     B7L28_04840 Enzymes [BR:vat01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      B7L28_04840 DNA replication proteins [BR:vat03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      B7L28_04840 DNA repair and recombination proteins [BR:vat03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      B7L28_04840    NER (nucleotide excision repair)     GGR (global genome repair) factors      B7L28_04840    MMR (mismatch excision repair)     DNA ligase      B7L28_04840   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       B7L28_04840 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia HHH_5 PTCB-BRCT HHH HHH_3 BRCT_2 RNA_pol_A_CTD Zn_ribbon_RlmA DUF4796_N Motif Other DBs NCBI-ProteinID:  ARF99333 LinkDB All DBs Position complement(1078950..1080950) Genome browser AA seq 666 aa AA seqDB search MNPKDRIEQLQKELTHAQYLYYVKDAPTMSDFEYDQKYRELVDLETAHPEYIVPSSPTQR VGIKADGPFEKVVHGRPMLSLSNVFSADEVRAFDQRVTKELGHQTKAYVVELKIDGLAVN LHYENGIFVRAVTRGDGKVGEDVTANVRTIKSIPLYLENAPEFIEIRGEAYMPHSEFKRI NEERDEDGLPTFVNPRNAAAGSLRQQDPAITASRNLAFFAYAIGSESGANIHTQEELLHT LENFHFSVNPHYRVCKTVDEVIEAIEYWGEKRHELPYDTDGMVIKVNDFDDQEVLGSTAK DPKWATAYKYPPEEVETIVKDITINVGRTGVLTPTGELEPVFVSGTNVSRVTLHNQDFIT EKDIRIGDHVLIHKAAEIIPEVIRVLPEKRTGTEVPFTIPNYCPVCESPAVRRDGEAAIR CTNKHCPAIEKEQIIHFASRDAMNIDGLGPSIVENLINEKLITNVVDLYHLTTESIMAMD RMGKKSADNLVKAIADSKSRGLDRVLFGLGIRLIGSKAAGTIANVVKSMDRFLTITKDEL VAVEEIGPTMADSIIEYREDPQHIEIIKGLIDAGLKMDVDVQETAGNEMEGETVVLTGKL EVMGRSEAGKLLEKHGAKVTGSVSKKTTLVIAGEDSGSKLTKANELGIRVINEEEFTELL RDLGEL NT seq 2001 nt NT seq  +upstreamnt  +downstreamnt atgaatcctaaagatagaatagaacaattacaaaaagaattgactcatgcgcagtattta tattatgtaaaagacgcgccaaccatgagcgattttgaatatgatcaaaaatatcgtgag ctcgttgatttagaaacggcacatccagaatatattgtgccatcatctcctacacagcgg gttggcatcaaggcggatggcccttttgaaaaggtggtccacggtagacctatgcttagc ttatccaatgtatttagtgcggatgaagtgcgtgcctttgatcaacgagtaacgaaggaa ttaggacatcaaacaaaggcctatgtagtggaattaaaaattgatggcttagctgttaat ttgcattacgaaaatggcatcttcgttcgtgctgtcacacgtggtgatggcaaggtgggg gaagatgtaacggcgaatgtacgtaccatcaaatccattcctttatacctagaaaatgcg ccagaatttatcgaaattcgcggtgaagcgtatatgccgcatagcgaatttaagcgtatc aatgaagaacgtgatgaagatggtttgccgacttttgttaatcctcgtaatgcggcggca ggttccttgcgtcaacaggaccctgctatcacagcgagtcgtaatcttgcgttctttgct tatgccattggttctgaaagtggtgccaatattcatacgcaagaggaattgttacataca ttggaaaattttcatttctctgtaaatcctcattatcgcgtatgtaagaccgtagacgaa gtgatagaggccattgagtattggggcgaaaaacgccatgaattaccatatgataccgat ggtatggttatcaaggttaatgactttgacgaccaagaggtgttaggctcaacggctaaa gatcctaagtgggctacggcttataaatatcctcctgaagaggtggaaacgattgtcaaa gatattactatcaatgtgggccgcaccggtgtattaacgccaactggagaattagaacct gtatttgtatccggtactaatgtgagccgtgttacattacataatcaagactttatcaca gaaaaagatattcgtattggtgaccatgtcctcattcacaaggcagctgaaatcattcca gaggtgattcgtgtattgcctgaaaaacgtactggcactgaggttcctttcacaattcct aattactgtcctgtttgtgaaagcccagcggtacgccgcgatggcgaagcggccattcgc tgtactaacaaacattgtcctgctattgaaaaggagcaaatcattcactttgcatctcgt gatgcgatgaatatcgatggccttggtccaagtattgtagaaaatttaattaatgaaaaa ttgattaccaatgttgtcgatttatatcatttgactacggaatctattatggctatggac cgtatgggcaaaaaatcggcagataaccttgtgaaagctatcgcagattctaaatctcgt ggattagatcgggtcttatttggccttggtattcgactcatcggttctaaagcagctggt acaattgctaatgttgtgaagtctatggatagattcctaaccattactaaggatgaatta gtagctgtagaagaaatcggtcctaccatggcagatagcattatcgaatatcgcgaagac cctcaacatattgagattatcaagggcttgattgatgctggtttaaaaatggacgtagat gtacaagaaaccgctggtaatgaaatggaaggggaaaccgttgttcttactggtaaacta gaggtcatgggtcgcagtgaagccggtaaactattagaaaaacatggtgcgaaggtgacc ggatccgtatctaaaaaaacaacacttgttattgctggtgaggatagtggcagtaaattg acgaaagcgaatgaacttggtattcgcgttattaatgaagaagaatttactgaattatta cgtgatttaggcgaattataa

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