Variovorax sp. 38R: IG196_06350
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Entry
IG196_06350 CDS
T10235
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
vav Variovorax sp. 38R
Pathway
vav00020
Citrate cycle (TCA cycle)
vav00270
Cysteine and methionine metabolism
vav00620
Pyruvate metabolism
vav00630
Glyoxylate and dicarboxylate metabolism
vav00680
Methane metabolism
vav00710
Carbon fixation by Calvin cycle
vav00720
Other carbon fixation pathways
vav01100
Metabolic pathways
vav01110
Biosynthesis of secondary metabolites
vav01120
Microbial metabolism in diverse environments
vav01200
Carbon metabolism
Module
vav_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vav_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vav_M00012
Glyoxylate cycle
vav_M00168
CAM (Crassulacean acid metabolism), dark
vav_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IG196_06350
00620 Pyruvate metabolism
IG196_06350
00630 Glyoxylate and dicarboxylate metabolism
IG196_06350
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
IG196_06350
00720 Other carbon fixation pathways
IG196_06350
00680 Methane metabolism
IG196_06350
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
IG196_06350
Enzymes [BR:
vav01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
IG196_06350
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QOF80015
UniProt:
A0A7L8SKJ8
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All DBs
Position
1428804..1429790
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AA seq
328 aa
AA seq
DB search
MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEL
DDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLAVNGAIFTAQGKALN
AVASRNVKVLVVGNPANTNAYIAMKSAPDLPRKNFTAMLRLDHNRAASQIAAKTGKAVAD
IEKLTVWGNHSPTMYADYRFATINGESVAKMINDQEWNANTFLPTVGKRGAAIIEARGLS
SAASAANAAIDHMRDWALGTNGKWVTMGIPSDGQYGIPKDVMFGFPVTCENGEYKLVEGL
DIDAFSQERINKTLEELEGERAGVAHLL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaagcctgtccgcgttgccgttaccggtgccgccggtcaaatcggttatgcc
ctgttgttccgtatcgcttccggcgaaatgctcggcaaagaccagccggtcatcctgcaa
ctgctcgaaatccccgacgagaaggcccagaaggcgctcaagggcgtgatgatggagctc
gacgactgcgccttcccgctgctggccggcatggaagcccacggcgacccgatgaccgcc
ttcaaggacgccgactacgccctgctggtcggctcgcgcccccgcggccccggcatggaa
cgtgccgaactgctggccgtcaacggcgccatcttcacggcacaaggcaaggcgctgaac
gccgtggcctcgcgcaacgtgaaggtgctggtcgtcggcaaccccgccaacaccaacgcc
tacatcgccatgaagtcggcaccggacctgccgcgcaagaacttcaccgccatgctgcgc
ctggaccacaaccgcgctgccagccagatcgccgccaagaccggcaaggccgtggccgac
atcgagaagctcaccgtctggggcaaccactcgcccacgatgtacgccgactaccgcttt
gcgaccatcaacggcgaaagcgtcgccaagatgatcaacgaccaggaatggaacgccaac
accttcctgccgaccgtcggcaagcgcggcgcggccatcatcgaagcacgcggcctgtcg
tcggctgcctcggctgccaacgccgccatcgaccacatgcgcgactgggccctgggcacc
aacggcaagtgggtcacgatgggcatcccgtcggacggccagtacggcattccgaaggac
gtgatgttcggcttcccggtcacctgcgaaaacggtgagtacaagctggtcgaaggtctc
gacatcgacgcattcagccaggaacgcatcaacaagacgctcgaagagctcgagggcgaa
cgcgccggcgtcgcccacctgctgtaa
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