Variovorax sp. 38R: IG196_13500
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Entry
IG196_13500 CDS
T10235
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18903
outer membrane protein, multidrug efflux system
Organism
vav Variovorax sp. 38R
Module
vav_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_13500
01504 Antimicrobial resistance genes [BR:
vav01504
]
IG196_13500
Transporters [BR:
vav02000
]
Other transporters
Pores ion channels [TC:
1
]
IG196_13500
Antimicrobial resistance genes [BR:
vav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
IG196_13500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QOF81329
LinkDB
All DBs
Position
2964456..2965949
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AA seq
497 aa
AA seq
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MTFGIPTLMRPLRTAMLPLVAALVLAGCASVPSGMPSVPTAAQFKEQPQQQPGATAPAGF
TRATPAEAQPRGEWWLAFNDPVLNTLVERAAVDNANIQAAAARLAEARALARSAQADRLP
QIGLGAGANRGAGLDKATASTRPGTMTNIGATFSYEVDLFGRLSGAADAAKLDAAGREAL
LQSTRLAVQAEVAQTYLQLRALDAERVLVRESVAAYRDTLRLTQRRQQAGDIAELDVARV
QTEVSSTESDALALDRQRAQVEHALAVLVGDSASSFGMRPDDWGTALPVIPPGVPSTVLT
RRPDVSAAQSAVMAAQARVGVAQTAWFPNISLTGAAGYASPEIGDLFKWSARSWGVGALL
SLPIFDGGRREAGVQGANAQLDGALASYRSQVLVAFQEVEDQLAAIRILQEQSVVQAQAV
TSAQRATSLSDTRYRNGYVSQLDLLDARRSELRNRRQALQVKSAQYQATVGLIRAIGGGW
EVPGAVASADAPRGPQS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacattcggaatccccaccctgatgcgcccgctgcgcaccgccatgctgccgctggtg
gcagccctcgtgctggcaggttgcgccagcgtgccttcgggcatgccttcggtgccgacc
gcggcccagttcaaggaacagccgcagcagcaaccgggcgccacggcgccggccggcttc
acccgggccacgcccgccgaggcgcaaccgcgcggcgagtggtggctggcgttcaacgac
ccggtgctcaacacgctcgtcgagcgtgccgcggtcgacaacgccaacatccaggccgcc
gccgcgcggctggccgaggcccgtgcgctggcacgcagcgcgcaggccgaccgcctgccg
cagatcggcctgggcgccggcgccaaccgcggtgcgggcctggacaaggccacggccagc
acccggccgggcaccatgaccaacatcggcgccacgttctcgtacgaggtcgacctgttc
ggtcgtctctcgggcgcggccgatgcggccaagctcgacgcggcgggccgcgaggcgctg
ctgcagagcacccggctcgcggtgcaggccgaagtggcgcagacctacctgcagctgcgc
gcgctcgatgccgaacgcgtgctggtgcgcgaatcggtcgccgcctaccgcgacacgctg
cgcctgacgcagcgccgccagcaggccggcgacatcgccgagctcgacgtggcgcgcgtg
cagaccgaggtgtcgtccaccgaatcggacgcgctcgcgctcgaccgccagcgggcccag
gtggaacacgcgctggccgtgctggtgggcgattcggcctccagcttcggcatgcggccc
gacgactggggcaccgcgctgccggtcattccgccgggcgtgccgtccaccgtgctcacg
cgccggcccgacgtgtcggccgcgcagagcgctgtcatggcggcgcaggcccgcgtgggc
gtggcgcagaccgcgtggttcccgaacatctcgctgaccggcgcggccggctacgcctcg
cccgagatcggcgacctcttcaagtggtcagcccgctcgtggggcgtgggcgcgctgctg
tcgctgccgatcttcgacggcggccgtcgcgaagccggcgtacagggtgccaacgcccag
ctcgacggtgcgctggccagctaccgctcgcaggtgctggtggcgttccaggaggtcgaa
gaccagctggccgcgatccgcatcctgcaggagcagtcggtggtgcaggcgcaggccgtg
acctcggcgcagcgcgccaccagcctgtcggacacgcgctatcgcaacggctacgtgagc
cagctcgacctgctcgacgcgcgccgcagcgagctgcgcaaccggcgccaggcgctgcag
gtgaagtcggcccagtaccaggcgaccgtggggctgatccgcgcgatcggcggcggctgg
gaagtgccgggtgccgtggcgtcggccgacgcaccgcgcggcccgcagagctga
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