Variovorax sp. 38R: IG196_22925
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Entry
IG196_22925 CDS
T10235
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vav Variovorax sp. 38R
Pathway
vav01501
beta-Lactam resistance
vav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IG196_22925
01503 Cationic antimicrobial peptide (CAMP) resistance
IG196_22925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vav03036
]
IG196_22925
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_22925
01504 Antimicrobial resistance genes [BR:
vav01504
]
IG196_22925
Chromosome and associated proteins [BR:
vav03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IG196_22925
Transporters [BR:
vav02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IG196_22925
Antimicrobial resistance genes [BR:
vav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IG196_22925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
HlyD_3
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
QOF77187
UniProt:
A0A7L8SBC5
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All DBs
Position
4952283..4953503
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AA seq
406 aa
AA seq
DB search
MPVHFASRSAPLLTALCIAAALVGCSRTNVESPGTAKATPEKEVGIVTLKSEVLALSTEL
PGRTAAPVIAEIRPQVGGILKERLFTEGSQVKAGQVLYQLDPASLQAAHASAQASVRKAE
SALATARTVAKRNAELVKIDAISRQVFDETQAAEQQAEADLGVARAAEQTARIQLGYTRI
TSPITGWAELSTVTPGALVTANQAAAMTTVQQLDPIHVHVTQSSSELLRLKRELASGRLQ
RASEAEARIQLLLEDGSPYPHAGRLTFSGVTVDAGTGSVTLRAVVPNPDKLLMPGMYVRA
VLQEGVNDAALLVPQQAVTRAPDGSASTLVIDADNKVEKRPIRIGRAIGTRWQVIDGLAT
GDRVLMEGSQRVKVGDKVRTVDLGARPAGAAVASAKPDAASATLAR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtccactttgcctcccgttccgccccgctcctcacggccctgtgcatcgccgcc
gccctcgtggggtgctcgcgcaccaacgtggagtcccccggcacggccaaggcgacccct
gaaaaagaagtcggcatcgtcacgctgaagtccgaggtgctcgccctgagcaccgagctg
cccgggcgcaccgccgccccggtcatcgccgagatccgcccgcaggtcggcggcatcctc
aaggagcggctcttcaccgaaggctcgcaggtcaaggccggccaggtgctctaccagctc
gacccggcctcgctgcaggcagcccatgcgagcgcgcaggccagcgtgcgcaaggccgag
tcagccctggccacggcccgcaccgtggccaagcgcaatgccgagctggtgaagatcgac
gctatcagccgccaggtgttcgacgagacccaggccgccgaacaacaggccgaggccgac
ctcggcgtggcgcgcgcggccgagcagaccgcgcgcatccagctgggctacacgcgcatc
acctcgccgatcaccggctgggccgagctctccaccgtcacgcccggtgcgctggtcacg
gccaaccaggcggccgccatgaccaccgtgcagcagctcgatccgatccatgtgcacgtc
acgcagtcgagcagcgagctcttgcgcctgaagcgcgagctggccagtggccggctgcag
cgcgccagcgaggccgaggcgcgcatccagctgctgctggaagacggcagcccctacccg
cacgccggacgcctcaccttcagcggcgtgacggtcgatgccggcaccggcagcgtcacg
ctgcgcgccgtggtgcccaaccccgacaagctgctgatgcccggcatgtacgtgcgcgcc
gtcttgcaagagggcgtgaacgacgccgcgctgctggtgccgcagcaggccgtcacgcgc
gcgcccgacggcagcgcctccacgctggtgatcgacgccgacaacaaggtcgagaagcgg
cccatccgcatcggccgcgccatcggcacgcgctggcaggtcatcgacggcctggccacg
ggcgaccgcgtgctcatggaaggctcgcagcgcgtgaaggtgggcgacaaggtgcgcacg
gtcgacctgggcgcccgccccgccggcgctgccgtcgcgagcgccaagcccgacgccgct
tccgccaccctcgcgcgctga
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