Variovorax sp. W6: SFB74_05345
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Entry
SFB74_05345 CDS
T11181
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
vaw Variovorax sp. W6
Pathway
vaw00300
Lysine biosynthesis
vaw00550
Peptidoglycan biosynthesis
vaw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SFB74_05345
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SFB74_05345
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vaw01011
]
SFB74_05345
Enzymes [BR:
vaw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
SFB74_05345
Peptidoglycan biosynthesis and degradation proteins [BR:
vaw01011
]
Precursor biosynthesis
Amino acid ligase
SFB74_05345
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF7739
Motif
Other DBs
NCBI-ProteinID:
XVK59953
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Position
1235987..1237546
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AA seq
519 aa
AA seq
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MLTFTSPQLVAAWLKERAPQAALHADSRAVGAGDVFIAWPGAATDGRRHVAAALAQGAAV
CLVEHEGVEPFGFDGDERIVSYPGLKAATGPIASAYYDNPSALLEVLAVTGTNGKTSTAW
WLAESLSTLRAAGGVRVMKPDGTMQRDAPSPCAVMGTLGIGVPPELTYTGLTTPDPVMMQ
RELRSLVTRGFGACAIEASSIGIAERRLDGAQISVAVFTNFTQDHLDYHGSMDAYWQAKA
ELFRWPGLRAAVINIDDTHGASLCANLIDAGIGALDVWTVSAGGKPARLVARDIGYDAQG
LQFSVAEHGTASVERLSTGLIGQYNVSNLLGVLGTLRALGLTLAQAVAACANLTSVPGRM
DRAGTGEGAPLAVVDYAHTPDALDKALIGLRPLARQRGGALWCLFGCGGDRDPIKRPMMA
AVAERQADRVIVTSDNPRSEKPDAIISQVLRGFSRPDAAQVQPDRAAAIADAIAQAAPQD
VVLIAGKGHEAWQEIAGQRIEFSDKAHALQALAKRGAAA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccttcacttccccccaactggtcgccgcctggctgaaggagcgcgcgccgcag
gccgcgctgcacgccgacagccgcgccgtgggcgcgggcgacgtcttcatcgcctggccc
ggcgccgccaccgacggccgcaggcacgtggccgccgcgctggcgcagggcgccgccgtc
tgcctggtggagcacgagggcgtcgagcccttcggcttcgatggtgatgagcgcatcgtg
agctaccccggcctgaaggccgccaccggcccgatcgcctcggcctactacgacaacccc
tcggccctgctcgaagtgctggccgtgacgggcaccaacggcaagacctccactgcctgg
tggctggccgaatcgctttccacgctgcgcgcggcgggcggcgttcgcgtgatgaagccc
gacggcaccatgcagcgcgacgcgccgtcgccctgcgcggtgatgggcacgctgggcatc
ggcgtgccgcccgagctgacctacaccggcctcaccacgcccgacccggtgatgatgcag
cgcgagctgcgctcgctggtcacgcgcggattcggcgcctgcgccatcgaggcatcgtcc
atcggcatcgccgagcgccgcctcgacggcgcgcagatttcggtggccgtgttcaccaac
ttcacgcaggaccacctggactaccacggcagcatggacgcctactggcaggccaaggcc
gagctgttccgctggcccggcctgcgcgccgcggtgatcaacatcgacgacacgcacggc
gccagcctctgcgcgaacctgatcgacgccggcatcggcgcgctcgacgtctggaccgtc
tcggccggcggcaagccggcccgcctcgtggcgcgcgacatcggctacgacgcgcagggc
ctgcagttctcggtggccgagcacggcacggcctccgtggagcgcctgtcgaccgggctc
atcggccagtacaacgtgtcgaacctgctgggcgtgctcggcacgctgcgcgcgctgggc
ctcacgctggcgcaggccgtggccgcctgcgccaatctcaccagcgtgcccggccgcatg
gaccgcgcgggcaccggcgaaggcgctccgctggccgtggtcgactacgcccacacgccc
gatgcgctcgacaaggcgctgatcggcctgcgcccgctggccaggcagcgcggcggcgcg
ctgtggtgcctgttcggctgcggcggcgatcgcgacccgatcaagcgcccgatgatggcc
gccgttgccgagcgccaggcggaccgcgtgatcgtcaccagcgacaacccgcgcagcgaa
aagcccgacgcgatcatcagccaggtgctgcgcggcttctcacgccccgacgcggcgcag
gtgcagcccgaccgcgcggccgccatcgccgacgcgatcgcgcaggccgcgccgcaagac
gtcgtgctcatcgccggcaagggccacgaggcctggcaggaaatcgccggccagcgcatc
gagttctcggacaaggcccatgcgctgcaggcgctggcgaagcgaggagcagcggcatga
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