Variovorax sp. W6: SFB74_17950
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Entry
SFB74_17950 CDS
T11181
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
vaw Variovorax sp. W6
Pathway
vaw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SFB74_17950 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaw03400
]
SFB74_17950 (nth)
Enzymes [BR:
vaw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SFB74_17950 (nth)
DNA repair and recombination proteins [BR:
vaw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SFB74_17950 (nth)
Prokaryotic type
SFB74_17950 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XVK56018
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All DBs
Position
3944536..3945183
Genome browser
AA seq
215 aa
AA seq
DB search
MKKDNIPLFFATLQAANPEPETELEYSTPFELLAAVLLSAQATDVGVNKATRKLFPVANT
PQAILDLGVEGLEEYIKTIGLYRSKAKHLVEACRMLVEQHGGEVPRTRAELEALPGVGRK
TANVVLNVAFGEATIAVDTHIFRVGNRTGLAPGKTPLEVELKLEKRVPLEYRLHAHHWLI
LHGRYICVARKPRCWECAVATFCAYKPKTPAPKTA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagacaacatccccctcttcttcgccaccctgcaggcagccaaccccgagccc
gagaccgagctggagtacagcacccccttcgaactgctggccgccgtattgctgtcggcg
caggccaccgacgtgggcgtcaacaaggccacccgcaagctctttccggtggcgaacacg
ccgcaggccatcctggacctcggcgtcgaggggctggaggaatacatcaagaccatcggc
ctgtaccgcagcaaggccaagcacctcgtcgaggcctgccgcatgctggtggagcagcac
ggcggcgaggtgccgcgcacccgcgccgagctggaggcgctgccgggcgtcggccgcaag
acggcgaacgtggtgctcaacgtggctttcggcgaagcgacgatcgcggtcgacacccac
atcttccgcgtgggcaaccgtaccgggctcgcgcccggcaagaccccgctggaagtggaa
ctgaagctcgagaaacgcgtccctctggagtaccgtcttcatgcgcatcactggctgatc
ctgcatggccgctacatctgcgtggcgcgcaagccgcggtgctgggagtgcgcggtggcg
accttctgcgcctacaagcccaagacgcccgcgccgaagacggcctga
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