Variovorax sp. W6: SFB74_18480
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Entry
SFB74_18480 CDS
T11181
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vaw Variovorax sp. W6
Pathway
vaw01501
beta-Lactam resistance
vaw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SFB74_18480
01503 Cationic antimicrobial peptide (CAMP) resistance
SFB74_18480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vaw03036
]
SFB74_18480
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaw02000
]
SFB74_18480
01504 Antimicrobial resistance genes [BR:
vaw01504
]
SFB74_18480
Chromosome and associated proteins [BR:
vaw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SFB74_18480
Transporters [BR:
vaw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SFB74_18480
Antimicrobial resistance genes [BR:
vaw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SFB74_18480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl
Biotin_lipoyl_2
Peptidase_M23
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
XVK56117
LinkDB
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Position
4056978..4058180
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AA seq
400 aa
AA seq
DB search
MKTMKRSTLAIALIALVVVIAAIFFMTGSKPSDKAADHATAAKGKDGAASPKPALTVTVA
KPEATELMLTLAANGNVAAWQEAVVGSESNGLKLAEVRVNVGDTVKKGQVLAVFSPETVQ
ADIAQSRASLAEARATAADAAGNAARARTLQATGALSQQQINQYQTTEQTAKARVEAAEA
VLAAQQVRGRNTQVLAPDDGVISARTATVGSVVSAGTELFRLIRQGRLEWRAEVTSAELS
RVSVGTTAFVVSASGAQVRGKVRSIAPTVDPQTRAALVYVDLPNVQQNTGVKAGMFARGD
FELGRSTAPTVPQAAVVPRDGFNNVFVLKPDNKVSQLKVQIGRRLNDRIEITSALPEGAQ
VVVQGAGFLNDGDLVRVVDAPAAATAAPAPAGAGSAAAAR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatgaagcgttccactctcgccatcgcgctgatcgcgctggtcgtcgtcatc
gcggcgatcttcttcatgaccggcagcaagccgtcggacaaggcggccgaccacgccacg
gcggccaagggcaaggacggtgccgcgtcgcccaagccggcactcaccgtcaccgtcgcc
aagcccgaagccaccgagctgatgctcacgctcgcggccaacggcaacgtggccgcgtgg
caggaagccgtggtcggctccgagtccaacggcctgaagctggccgaagtgcgcgtgaac
gtgggcgatacggtgaagaagggccaggtgctcgcggtgttctcgcccgagacggttcag
gccgacatcgctcagtcgcgcgcttcgctggcggaggcacgcgcgaccgcagccgacgcc
gccggcaacgccgcgcgcgcccgcaccctgcaggccacgggcgcgctcagccagcagcag
atcaaccagtaccagaccacggagcagaccgccaaggcgcgggtcgaggcagccgaggcc
gtgctggccgcgcagcaggtacgcgggcgcaacacgcaggtgctggcgcccgacgacggc
gtgatctcggcgcgcaccgccacggtaggcagcgtggtttcggcgggtacggagctcttc
cgcctgatccgccagggccggctcgaatggcgcgccgaagtgacctcggccgaactcagc
cgcgtttcggtcggcaccaccgccttcgtggtcagcgccagcggcgcgcaggtgcgcggc
aaggtgcgcagcatcgctcccaccgtcgatccgcagacgcgtgcggcgctggtgtatgtc
gacctgcccaacgtgcagcagaacaccggcgtcaaggccggcatgttcgcgcgcggcgac
ttcgagcttggccgcagcaccgcgccgacggtgccgcaggccgccgtggtgccgcgcgac
ggcttcaacaacgtgttcgtgctgaagcccgacaacaaggtgtcgcagctgaaggtgcag
atcggccggcgcctgaacgaccgcatcgagatcaccagcgcgctgcccgaaggcgcacag
gtggtggtgcaaggcgcgggcttcctcaacgacggcgacctggtgcgcgtggtggatgca
cccgccgccgcgaccgctgcgccggcacccgcgggcgcgggctcggcagcggccgccagg
taa
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