Variovorax sp. W6: SFB74_26670
Help
Entry
SFB74_26670 CDS
T11181
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vaw Variovorax sp. W6
Pathway
vaw01501
beta-Lactam resistance
vaw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SFB74_26670
01503 Cationic antimicrobial peptide (CAMP) resistance
SFB74_26670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vaw03036
]
SFB74_26670
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaw02000
]
SFB74_26670
01504 Antimicrobial resistance genes [BR:
vaw01504
]
SFB74_26670
Chromosome and associated proteins [BR:
vaw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SFB74_26670
Transporters [BR:
vaw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SFB74_26670
Antimicrobial resistance genes [BR:
vaw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SFB74_26670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
BSH_CusB
BSH_CzcB
HH_EMRA
HH_YBHG
HH_AAEA_pHBA
YknX_C
Motif
Other DBs
NCBI-ProteinID:
XVK57697
LinkDB
All DBs
Position
5850086..5851225
Genome browser
AA seq
379 aa
AA seq
DB search
MTSKLLLLPLSLIVLAACGARQAPDTETAPPEVGVMAMHASDVPVHTELSGRTAAFRVSE
VRPQVNGIVRKRLFDEGSMVRAGQVLYEIEPGSFEAAHEQAQASLATAQASIASLRGKAE
RFGELVKANAVSRQEHEEAQAALVQAQAGVKAAQAALKAARINLEFTRIEAPISGRIGRS
SVTEGALVAPGQATALATIQRIDPIYVDVVQSSLELTRLKRRFISGDMAPASTRVSLRME
DGLPYPHAGTLKFTEVAVDAATGSVTLRAEFPNPQGLLLPGMYVRAQVESGVERQAILAP
QRGVARNDKGEPTALVVGKDDKVELRALEVRSAAGDQWIVTGGLREGDRLVVDGLQRAHP
GDKVKPVPVAAAATPSSAD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaagcttctgcttcttcccctttccctgatcgtgctcgccgcatgcggcgcc
aggcaggcccccgacaccgaaaccgcgccgcccgaagtcggcgtgatggcgatgcacgcg
agcgacgtgccggtgcacaccgagctctcgggccgcacggctgcattccgcgtgtccgag
gtgcgcccgcaggtcaacggcatcgtgcgcaagcgcctgttcgacgaaggcagcatggtc
cgcgccggccaggtgctgtacgagatcgagcccggctccttcgaggccgcgcacgagcag
gcgcaggcctcgctcgcgaccgcgcaggccagcatcgcgagcctgcgcggcaaggccgag
cgattcggcgaactggtgaaggccaatgccgtgagcaggcaggagcacgaggaggcccag
gcagcgctcgtgcaggcgcaggccggcgtgaaggccgcgcaggctgccctgaaggcggcg
cgcatcaacctcgagttcacgcgcatcgaggcgcccatctcgggccgcatcggccgctcc
agcgtgaccgaaggcgccctggtggcgccgggccaggccacggcgctcgcgaccatccag
cgcatcgacccgatctatgtcgacgtggtgcagtccagcctcgagctcacgcggctcaag
cgccgcttcatctcgggcgacatggcgcccgcgagcacgcgcgtgagccttcgcatggaa
gacggcctgccctacccgcacgccggtacgctgaagttcaccgaagtggccgtcgacgcc
gcgaccggctcggtcacgctgcgtgcggagttccccaatccgcaggggctgctgctgccc
ggcatgtacgtgcgcgcgcaggtcgagtccggcgtggagcgccaggccatcctcgcgccg
cagcgcggcgtggcgcgcaacgacaagggcgagccgaccgcgctggtggtgggcaaggac
gacaaggtcgaattgcgcgcgctcgaagtgcgcagcgcggcgggcgaccagtggatcgtg
accggcgggctgcgcgaaggcgaccggctcgtggtcgacggcctgcagcgcgcgcacccg
ggcgacaaggtgaagccggtgccggtcgcggcggcggctacgccttcctcggcagattga
DBGET
integrated database retrieval system
