Variovorax sp. W6: SFB74_30390
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Entry
SFB74_30390 CDS
T11181
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
vaw Variovorax sp. W6
Pathway
vaw01501
beta-Lactam resistance
vaw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SFB74_30390
01503 Cationic antimicrobial peptide (CAMP) resistance
SFB74_30390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaw02000
]
SFB74_30390
01504 Antimicrobial resistance genes [BR:
vaw01504
]
SFB74_30390
Transporters [BR:
vaw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SFB74_30390
Antimicrobial resistance genes [BR:
vaw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SFB74_30390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF3561
SMC_N
Motif
Other DBs
NCBI-ProteinID:
XVK58394
LinkDB
All DBs
Position
6626352..6629492
Genome browser
AA seq
1046 aa
AA seq
DB search
MARFFIDRPIFAWVIAIVIMLAGAMSIGTLSLEQYPDIAPTKVSINATYTGASAKTIEDS
VTQVIEQKMKGLDRLVSMSSSSTSSGTARIELTFEAGTNADVAQMQVQNKLQQAESQLPQ
SVQSQGVTVTKSGTDFLMIVSLISEDGSASATDIGDYISSSLLDVISRIDGVGDVQTLGS
GYAMRIWLDPAKLQKYSLMPSDVTSALTSQNTEVSAGQLGALPAASGQRLTATITARSKL
RTADQFREVIVKSDASSGAIVRLGDVARIELGSESYTISSRFDGKPSAAMGVKLATGANA
LTVSNAVKAKLAELGPFFPNQMKAVVGYDTTPFVRISIEEVAKTLVEAMVLVVLIMYLFL
QNLRATLVPAIAVPVVLLGTFGVLALMGYSINTLTMFGMVLAIGLLVDDAIVVVENVERL
MTEEGLSPKEATRKSMREITGALVGIALVLSAVFIPMAFFGGSTGVIYRQFSVTIVASML
LSVLVALTLSPALCATLLKPVQAGHHEEKRGFFGWFNRNFERNADRYRSGVGGLLRRGKR
SLLTYALLVAVLGVVFMRLPTSFLPDEDQGTLMAQVKLPASATDEQLQQTMKSFEAYLGS
QKEVAHFITLTGLSGDQATGNAFITLKDWGERGGKAQDAASLARRFTMDMASRAANANVF
VMLPPAVRGLGSNAGFDVQLQDLGGIGHEALVQAREQFLSLARKDPALSQVRSNNLDDTP
QFAIDIDDRKAAALGLSTSDINDTLSSAMGGSYVNDFINNGRVKKVYVQADAPFRMQPDS
IDSWHVRNGSSEMVPFSAFASSRWTYGSPQLSRYNGMSSFELIGDPAAGVSSGTAMDAVE
RIMKQLPQGIGYEWAGSSYQERLSGSQAPLLYAVSILFVFLCLAALYESWSVPFSVMLVV
PLGVLGAVLATKLAGLSNDVYFQVGLLTTVGLSAKNAILIVEFAKQLQDEGMALVEATLQ
AVRLRLRPILMTSLAFMFGVLPLALSTGAGSGSRRAIGVGVLGGVATATALGIFFVPLFF
VVIRRFFAQKKKPEAAAPSLTAQPEA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcacgctttttcatagaccggcccatcttcgcgtgggtcatcgccatcgtcatcatg
ctggccggggcgatgtccatcggcactctgtcgctggagcagtaccccgacatcgcgccc
accaaggtcagcatcaacgcgacctacacgggcgcctcggccaagaccatcgaggactcg
gtcacgcaggtgatcgagcagaagatgaagggcctcgaccggctggtgtcgatgtcctcc
agcagcacctcgtcgggcaccgcgcgcatcgagctcaccttcgaggccggcaccaacgcc
gacgtggcgcagatgcaggtgcagaacaagctgcagcaggccgagtcgcagctgccgcag
tcggtgcagagccagggcgtgacggtcaccaagtcgggcaccgacttcctcatgatcgtc
tcgctgatctccgaagacggcagcgcctcggccaccgacatcggcgactacatctccagc
agcctgctcgacgtgatcagccgcatcgacggcgtgggcgacgtgcagacgctgggctcg
ggctacgcgatgcgcatctggctcgatccggcgaagctgcagaagtactcgctgatgcca
tcggacgtgaccagcgcgctcaccagccagaacaccgaggtgtcggccggccagctcggc
gcgctgcctgcggcctcgggccagcgcctgaccgcgaccatcaccgcgcgcagcaagctg
cgcaccgccgaccagttccgcgaggtgatcgtcaagtcggacgccagcagcggtgccatc
gtgcgcctgggcgacgtggcgcgcatcgaactcggcagcgagagctacaccatcagctcg
cgcttcgacggcaagccctcggccgccatgggcgtgaagctggccaccggcgccaacgcg
ctcaccgtgtcgaacgcggtgaaggccaagctcgcggagcttgggcccttctttcccaac
cagatgaaggccgtggtcggctacgacaccacgcccttcgtgcgcatctccatcgaggaa
gtggccaagacgctggtcgaggcgatggtgctggtcgtgctgatcatgtacctcttcctg
cagaacctgcgcgccacgctggtgcccgccatcgcggtgccggtggtgctgctgggcacc
ttcggcgtgctggcgctgatgggctattcgatcaacacgctcacgatgttcggcatggtg
ctggccatcggcctgctggtggacgacgccatcgtggtggtggagaacgtcgagcggctg
atgaccgaggaagggctctcgcccaaggaggccacgcgcaagtcgatgcgcgagatcacc
ggcgcgctggtgggcatcgcgctggtgctgtcggcggtgttcatcccgatggccttcttc
ggcggctcgacgggcgtgatctaccggcagttctcggtgaccatcgtggcgtcgatgctg
ctgtcggtgctggtggcgctcacgctgtcgccggcgctgtgcgccacgctgctcaagccc
gtgcaggccggccatcacgaggaaaagcgcggcttcttcggctggttcaaccgcaacttc
gagcgcaacgccgaccgctaccgctcgggcgtcggtggcctgctgcggcgcggcaagcgc
agcctgctgacctacgcgctgctggtggccgtgctcggcgtggtcttcatgcgcctgccg
acctccttcttgcccgacgaagaccagggcacgctgatggcgcaggtgaagctgcccgcc
agcgccaccgacgagcagctgcagcagaccatgaagagcttcgaggcctacctgggctcg
cagaaggaagtggcccacttcatcacgctgaccggcctgagcggcgaccaggccacgggc
aacgccttcatcacgctgaaggactggggcgagcgcggcggcaaggcgcaggacgccgcc
tcgctggcgcgccgcttcaccatggacatggcatcgcgggccgccaacgccaacgtgttc
gtgatgctgccgccggccgtgcgcggcctgggctcgaacgccggcttcgacgtgcagctg
caggacctgggcggcatcggccacgaggcgctggtgcaggcgcgcgagcagttcctctcg
ctggcgcgcaaggacccggcgctgagccaggtgcgcagcaacaacctggacgacacgccg
cagttcgccatcgacatcgacgaccgcaaggccgcggcgctgggcctgtcgacctcggac
atcaacgacacgctctccagcgcgatgggcggcagctacgtgaacgacttcatcaacaac
ggccgcgtgaagaaggtctacgtgcaggccgacgcgcccttccgcatgcagcccgacagc
atcgacagctggcacgtgcgcaacggcagcagcgagatggtgcccttctcggccttcgcc
agcagccgctggacgtatggctcgccgcagctgtcgcgctacaacggcatgtcgtccttc
gagctgatcggcgacccggccgcgggcgtgagctcgggcacggcgatggacgctgtggag
cgcatcatgaagcagctgccgcagggcatcggctacgaatgggcgggcagctcctaccag
gagcggctgtcgggctcgcaggcgccgctgctgtacgcggtgtcgatcctgttcgtgttc
ctgtgcctggcggccctgtacgagagctggtcggtgccgttctcggtgatgctggtggtg
cctctgggcgtgctgggcgcggtgctggcgaccaagctggcggggctgtcgaacgacgtg
tacttccaggtggggctgctcaccaccgtgggcctgtcggcgaagaacgcgattctcatc
gtggagttcgccaagcagttgcaggacgagggcatggcgctggtcgaggccacgctgcag
gcggtgcgcctgcggctgcggcccatcctgatgacctcgctggccttcatgttcggcgtg
ctgccgctggcgctgagcaccggcgccggctcgggcagccgccgcgccatcggcgtgggc
gtgctcggcggcgtggcaacggccaccgcgctgggcatcttcttcgtgccgctgttcttc
gtcgtgatccggcgcttcttcgcgcaaaagaaaaagcccgaggcggcggctccctcgttg
accgcacagccggaggcatga
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