Variovorax sp. PAMC26660: H7F35_05515
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Entry
H7F35_05515 CDS
T10234
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz01501
beta-Lactam resistance
vaz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H7F35_05515
01503 Cationic antimicrobial peptide (CAMP) resistance
H7F35_05515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vaz03036
]
H7F35_05515
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaz02000
]
H7F35_05515
01504 Antimicrobial resistance genes [BR:
vaz01504
]
H7F35_05515
Chromosome and associated proteins [BR:
vaz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H7F35_05515
Transporters [BR:
vaz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H7F35_05515
Antimicrobial resistance genes [BR:
vaz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H7F35_05515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
BSH_CusB
HH_EMRA
HH_YBHG
BSH_YhbJ
HH_AAEA_pHBA
T2SSM
BSH_CzcB
YknX_C
Motif
Other DBs
NCBI-ProteinID:
QNK69173
LinkDB
All DBs
Position
1166565..1167716
Genome browser
AA seq
383 aa
AA seq
DB search
MTTFKLLLPLSLLALAACGAKQPPATDAAPPEVGVMALHASDVAVHTELSGRTAAYRVSE
VRPQVNGIVRKRLFEEGSMVRAGQVLYEIEPGPFEAAHEQAQATLATSQATIASLRGKAE
RFAELVKANAVSKQEHEEAQAALIQAQAGVKAAQAAVKAARINLDFTRISAPIAGRIGRS
GVTEGALVAPGQAMALATIQRLDPIYVDVVQSSLELTKLKRRFISGDMAPASTQVSLRME
DGLPYPHAGTLKFSEVSVDTATGSVTLRAEFPNPQGLLLPGMYVRAQVESGVERQAILAP
QRGVARNEKGEPTALVVGAGDKVELRSLEVRSAEGEHWVVTKGLRDGDRLVVDGLQRAHP
GEKVKPVPVSASASTAATASSAD
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccttcaagctcttgcttcccctttccctgctcgcgctcgctgcatgcggcgcc
aagcagcctcccgccaccgatgccgcgccgcccgaagtcggcgtgatggcgctgcacgcc
agcgacgtggccgtgcacaccgaactctccggccgcaccgccgcctaccgtgtctccgag
gtccggccgcaagtcaacggcatcgtgcgcaagcgtctgttcgaggaaggcagcatggtc
cgcgcgggccaggtgctgtatgagatcgagcccggcccgttcgaggcggctcacgagcag
gcgcaagccacgctggccacctcgcaggccaccattgccagcctgcgcggcaaggccgag
cgctttgccgaactggtcaaggccaacgccgtgagcaagcaggaacacgaagaagcgcag
gccgcgctcattcaggcacaagccggcgtgaaagccgcgcaggcagcggtgaaggcagcg
cgcatcaacctcgacttcacccgcatctccgcccccatcgcgggacgcatcggccgctcg
ggtgtgaccgagggcgcgctcgtggcaccgggccaggcgatggcgctggccacgatccag
cggctcgacccgatctatgtcgacgtggtgcagtcgagcctggagctgacgaagctcaag
cgccgtttcatctcgggcgacatggcaccggccagcacccaggtcagcctgcgcatggaa
gacggcctgccctacccgcatgcaggcacgctgaagttctccgaagtgagcgtcgatacg
gccaccggctcggtcacgctgcgcgcggagttcccgaacccgcaggggctgctgctgccc
ggcatgtacgtgcgcgcgcaggtcgagtccggcgtggagcgccaggccatcctggcgccg
cagcgcggtgtggcccgcaacgagaagggcgagccgaccgcgctggtggtcggtgccggc
gacaaggtcgagctgcgttcgctcgaagtgcgcagcgccgagggcgagcactgggtcgtg
accaagggcctgcgcgacggcgaccgcctcgtggtcgacggactgcagcgcgcgcacccc
ggcgaaaaggtcaagccggtgccggtgtccgcgagcgcatcgaccgcggcgaccgcttcc
tcggccgattaa
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