Variovorax sp. PAMC26660: H7F35_19775
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Entry
H7F35_19775 CDS
T10234
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz01501
beta-Lactam resistance
vaz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H7F35_19775
01503 Cationic antimicrobial peptide (CAMP) resistance
H7F35_19775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaz02000
]
H7F35_19775
01504 Antimicrobial resistance genes [BR:
vaz01504
]
H7F35_19775
Transporters [BR:
vaz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H7F35_19775
Antimicrobial resistance genes [BR:
vaz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H7F35_19775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Lipoprotein_15
Motif
Other DBs
NCBI-ProteinID:
QNK65455
LinkDB
All DBs
Position
complement(4215845..4219030)
Genome browser
AA seq
1061 aa
AA seq
DB search
MAQFFIDRPIFAWVLSIVVMLAGLMAIRTLPLEQYPDIAPSRVSINATYTGASAKTVEDS
VTQVIEQQMKGLDNLLYMQSTSNSSGVARLSLTFNAGTNIDVAQMQVQNKLQQAMSRLPQ
QVQSRGVTVTKGGNDFLLIVSMYSGDGSASAVDVGDYISSNLVDVISRIDGVGEVQTLGT
GYAMRLWLDPDKLRKYALMPSDVGAAITAQNAQVSAGQLGALPASAQQQLNATITARSKL
QTAEQFENVVLRATPDGAVVRLKDVARVELGAENLTVRSQLGGRPGAGLGVVLADGANAV
QVAEAVKAKVAELQPLFPNQLQTFVSYDTTPFVSASIDEVVKALAEAMLLVVLVMYVFLQ
NFRATLIPAIAVPVVLLGTFGVLSIAGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
HEEGLSPKEATRKSMAEITPALVGIALVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMAL
SVFVALTLTPALCATLLKPVAKGQHAVARRGVLGAADRFFAGFNRNFDKGADRYQGVVGG
IIRRGKRSIVVYLLIAAVMALLFMRLPTSFLPDEDQAFLQVQVTLPPGASDARLQPVVTQ
MQDYFTQQPEVLSVNVITGQNGDQSSARAFVKLKDWAEREGDGQSAAALARRANKDLSTI
RDARIFVLLPPAVRGLGANAGFNFHLKDINGLGHDALVKARDQLIELLSKRSEVANVRSN
NLDDTPQFAVDIDDARAGAASLATSDIDSTLSSAMGGTYINDFLDNGRVKRVYMQGDTAF
RMLPADIDRWSVRNSLGQMVPFPAFSSSRWTYGSPQLQRYNGSPSYEFVGDAAPGVSSGD
AMAAVDEVMKQMPPGIGYEWTGASFQERLSGAQAPVLYAISILFVFLCLAALYESWSVPF
SVILVVPLGIVGALMFTSFRGLSNDVYFQVGLLTTVGLSSKNAILIVEFAKQLQEQGKSV
VEATLMAVRLRLRPILMTSLAFGFGVLPLAIGTGAGAGGRQSIGTAVLGGMVVGTALGIF
FVPLFFALIRGWLQGRRKPVVPDDEANGSQPAAAAAEQGGH
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttcttcatcgaccgccccatcttcgcgtgggtgctctccatcgtcgtcatg
ctcgccggcctgatggccatccgcacgctgccgctggagcagtaccccgacatcgcgccg
tcacgcgtgtccatcaatgccacctacaccggcgcctcggccaagacggtcgaagactcc
gtcacgcaggtcatcgagcagcagatgaagggactggacaacctgctctacatgcagtcg
accagcaactcgtcgggcgtggctcgcctgtcgctcaccttcaacgccggcaccaacatc
gacgtggcccagatgcaggtgcagaacaagctgcagcaggccatgtcgcgcctgccgcag
caggtgcaaagccgcggcgtcaccgtcaccaaaggcggcaacgacttcctgctgatcgtc
tcgatgtactcgggcgacggcagtgcatcggccgtggacgtgggcgactacatcagcagc
aacctggtcgacgtcatcagccgcatcgacggcgtgggcgaagtgcagacgctgggcacc
ggctatgccatgcgcctgtggctcgaccccgacaagctgcgcaagtacgcgctgatgcct
tcggacgtcggcgccgccatcaccgcgcagaacgcgcaggtgtcggccggccagctcggc
gcgctgccggccagcgcgcaacagcagctcaacgccaccatcaccgcgcgcagcaagctg
cagacggcggagcagttcgagaacgtggtgctgcgcgccacgcccgacggcgccgtggtg
cggctgaaggacgtggcccgcgtcgaactcggcgccgagaacctcacggtgcgctcgcaa
ctcggtggccgccccggcgcggggctgggcgtggtgctggccgatggtgccaacgcggtg
caggtggccgaggcggtgaaggccaaggtggccgagctgcaaccgctctttcccaaccag
ctgcaaaccttcgtgagctacgacaccacgcccttcgtcagtgcatccatcgacgaagtg
gtgaaggcgctggccgaggccatgctgctggtcgtgctggtgatgtacgtctttctgcag
aacttccgcgcgacgctgatcccggcgattgcagtgccggtggtgctgctgggcaccttc
ggcgtgctgtcgattgcgggctactcgatcaacacactcaccatgttcggcatggtgctg
gccatcggcctgctggtggacgacgccatcgtggtggtggagaacgtcgagcgcgtgatg
cacgaggaaggcctctcgcccaaggaggccacgcgcaagtcgatggccgagatcacgccg
gcgctggtcggcattgcgctggtgctgtcggcggtgttcatccccatggccttcttcggc
ggctcgaccggtgtgatctaccggcagttctcgatcaccatcgtctcggccatggcgctg
tcggtgttcgtggcgctcacgctcacgccggcgctgtgcgcgacgctgctcaagcccgtc
gccaagggccagcacgcggtggcccgccgcggcgtgctcggcgcggccgaccgcttcttt
gcaggcttcaaccgcaacttcgacaagggcgccgatcgctaccagggcgtggtgggcggc
atcattcggcgcggcaagcgcagcatcgtggtgtacctgctgatcgcggccgtgatggcg
ctcttgttcatgcgactgccgacctcgttcctgcccgatgaagaccaggcctttttgcag
gtgcaggtgacgctgccgcccggcgcgtcggacgcgcggctgcagccggtggtcacgcag
atgcaggactacttcacccaacagcccgaggtgctgagcgtcaacgtcatcaccggacag
aacggcgaccagagttcggcgcgcgccttcgtcaagctcaaggactgggccgagcgcgaa
ggcgacggccagtcggccgcagcgctggcgcggcgcgccaacaaggacctgtcgaccatc
cgcgacgcacgcatcttcgtgctgctgccgccggcagtgcgcgggctcggcgccaacgcg
ggcttcaacttccacctgaaggacatcaacggcctgggccacgatgcgctggtgaaggca
cgcgaccaactcatcgaactgttgtccaaacggtccgaggtggcgaacgtgcgcagcaac
aacctggacgacacgccgcagtttgcggtcgacatcgacgacgcgcgcgctggggctgcc
agcctggccacgtccgacatcgacagcacgctgtcgagcgcgatgggcggcacctacatc
aacgactttctggacaacgggcgcgtgaagcgcgtgtacatgcagggcgacaccgccttt
cggatgctgcccgccgacatcgaccgctggagcgtgcgcaacagcctcggccagatggtg
ccgttcccggccttctccagctcgcgctggacttatggctcgccgcaactgcagcgctac
aacggcagcccgagctacgagttcgtgggcgatgccgcgccgggcgtgagttcgggcgac
gccatggctgcggtggacgaagtgatgaagcagatgccacccggcatcggctacgaatgg
accggcgcatcgttccaggaacggctgtcgggtgcgcaggcgccggtgctgtatgccatc
tcgatcctgttcgtgttcctgtgtcttgcggccctgtatgagagctggtcggtgccgttt
tcggtcattctggtcgtgccgctgggcatcgtcggcgcgctgatgttcaccagcttccgg
ggcctgagcaacgacgtgtactttcaggtcggcctgctcaccaccgtggggctgtcgtcg
aagaacgcgattctgatcgtcgagttcgccaagcagttgcaggagcaaggcaagagcgtg
gtcgaggccacgctgatggcggtgcggctgcgcctgcgcccgatcctgatgacctcgctg
gccttcggcttcggcgtactgccgctggccatcggcacaggcgccggtgcgggtggccgc
cagtcgatcggcactgcggtgctgggtggcatggtggtcggtactgcgctcggcatcttc
ttcgtgccgctgttctttgcgttgattcgcggatggttgcaggggcggcgcaaacctgtt
gtgcctgatgacgaggcgaatggatcgcagcccgctgcggccgctgccgaacagggaggc
cactga
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