Verrucomicrobia bacterium IMCC26134: IMCC26134_11395 Help Entry IMCC26134_11395   CDS       T03830                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism vba  Verrucomicrobia bacterium IMCC26134 Pathway vba03030   DNA replication vba03410   Base excision repair vba03420   Nucleotide excision repair vba03430   Mismatch repair Brite KEGG Orthology (KO) [BR:vba00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     IMCC26134_11395    03410 Base excision repair     IMCC26134_11395    03420 Nucleotide excision repair     IMCC26134_11395    03430 Mismatch repair     IMCC26134_11395  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:vba03032]     IMCC26134_11395    03400 DNA repair and recombination proteins [BR:vba03400]     IMCC26134_11395 Enzymes [BR:vba01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      IMCC26134_11395 DNA replication proteins [BR:vba03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      IMCC26134_11395 DNA repair and recombination proteins [BR:vba03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      IMCC26134_11395    NER (nucleotide excision repair)     GGR (global genome repair) factors      IMCC26134_11395    MMR (mismatch excision repair)     DNA ligase      IMCC26134_11395   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       IMCC26134_11395 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT BRCT_2 HHH Nlig-Ia Prot_ATP_ID_OB_C UPF0758_N Zn_ribbon_NUD Motif Other DBs NCBI-ProteinID:  AKC84099 UniProt:  A0A0E3YYW3 LinkDB All DBs Position 2996213..2998300 Genome browser AA seq 695 aa AA seqDB search MARLRAEIAAQDERYYRHARPEITDFDYDRLKRALADLELAHPSAASAAGAASPTRRVGD DRSEGFARVKHRFGMTTLDNTYDEGELRDFHARLVKALGTEDLAYTVEPKIDGVAVSLTY ENGHFTRAVTRGDGEEGDDITANVRTIRALPALLSAPPPGDLFAAPAALPQLIEIRGEIF LRDEEFRRINALQEEAGEAPYANPRNLAAGTVKLLDPALVATRKLEIVLYGLGACEPAPD ARAEPDSDSPAASAGFDSQSGFQTRLRVWGLPVVEKFWAVRGIDAVLASIRELDALRRGF AYPTDGAVVKLDAFARQRVVGYRGEGQAARKLSPRWACAYKFAPDRAETRILAITLQVGR TGAVTPVAELEPILLAGTTVKRATLHNADEIARKDVRVGDTVLVEKAGEIIPAVIEVVLA KRPAESTAYVFPADCPSCGTPLSREEGGVKWMCLNPLCPEKVRRRIEHFTSKACVDIDGL GEEIVDLLLAKKIIRGVPDLFRLTREQLLPLKKSGELWAANLVNAIAARRTADLWRVIHG LGIPQVGAAAAKDLARRFRSLEALAEASLNEIIQIDGFGEKTAESVLTWFNQPVNRVLVA ELTAAGLAPTPPATGPAGGFFAGKTLVLTGTLPSLSREEAQALIEAAGGKVSSSVSKKTH YVVAGEEAGSKLEKARALGVAVLDEAGLRALLAAG NT seq 2088 nt NT seq  +upstreamnt  +downstreamnt atcgcccgcctccgcgcggagatcgccgcccaagacgaacgctactaccgccacgcgcgt cccgagatcaccgacttcgactacgaccggctcaaacgcgccctcgccgacctcgagctc gcccacccctccgccgcttccgcagccggagcagcctcccctacccgccgcgtcggcgac gaccgcagcgagggctttgcccgcgtgaaacatcgcttcggcatgaccaccctcgacaat acctacgacgagggcgaactgcgcgattttcacgcccgtctggtcaaggcgctcggcacc gaggacctcgcttacaccgtcgagcccaagatagacggcgtcgcagtcagcctcacctac gaaaacggtcacttcacccgcgccgtcacccgtggcgacggtgaggaaggcgacgacatc accgccaacgtccgcaccatccgcgccctgcccgccctgctctccgctccgcccccaggg gacttgttcgccgcccccgcagcactccctcaactgatcgaaattcgcggtgaaattttc ctgcgggacgaagagttccggcgcatcaacgctctccaggaagaagccggcgaagccccc tacgccaacccgcgcaacctagccgccggcaccgtcaaactcctcgaccccgcgctcgtc gccacccggaaactggaaatcgtgctctacggcctgggcgcctgcgaacccgcgcccgat gccagagccgagcccgattccgactcccccgccgcctcggcgggcttcgattcgcaatcc ggcttccagacccgcctgcgcgtctggggcctgccggtcgtggaaaaattctgggccgtg cgcggcatcgacgccgtgctcgcctccattcgcgagctcgacgccctccgccgcggcttc gcctacccgaccgacggcgcggtggtaaagctcgatgccttcgcccggcaacgtgtcgtc ggctatcgcggcgaaggccaggcggctcgaaaactctcccctcgctgggcctgcgcctac aaattcgcccccgatcgcgccgagacccgcatcctcgccatcacgctgcaagtcggccgc accggcgccgtcacccccgtagccgagctcgaacccatcctgctcgccggcaccacggtc aaacgcgccaccctccacaacgccgacgagatcgcccgcaaggacgttcgcgttggcgac accgtgcttgtggaaaaggccggcgagatcatccccgctgtcatcgaagtagtgctcgcc aagcgccccgcagagagcaccgcctacgtcttccccgcggattgtccctcctgcggcaca ccgctctcgcgcgaagaggggggcgtcaaatggatgtgcctgaatccgctttgccccgaa aaagttcgccgccgcatcgagcatttcacttccaaagcctgcgtcgatatcgacggcctc ggcgaggagatcgtcgatctgttgctcgccaaaaaaatcatccgcggcgttccggatctc ttccggctcacgcgtgaacagttgttgcccttgaaaaaatccggcgagctctgggcggcc aatctggtgaacgccatcgccgcccgccgcaccgccgacctttggcgggtcattcacgga ctgggcatcccgcaggtgggcgccgccgccgccaaggatctcgcgcgtcgcttccgctcc ctcgaggcgctcgccgaagcctcgctcaacgagatcatccagatcgacggctttggcgaa aaaaccgccgagtccgtgcttacttggttcaaccagcccgtcaaccgcgtgctcgtcgcg gagctcaccgccgcgggtctcgcccctactcctcccgccaccggtcccgccggcggcttc ttcgcaggcaaaaccctcgtcctcaccggcacacttccgtcgctcagccgcgaggaggcc caggctctgatcgaggccgccggcggcaaggtcagcagcagcgtatccaaaaaaacccac tacgtcgtcgccggcgaggaggccggttcgaagctcgaaaaagcccgcgccctcggcgta gccgtgctcgacgaggccggcctgcgcgccttgctggcggcaggctga

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