Variovorax boronicumulans: CKY39_08455
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Entry
CKY39_08455 CDS
T05068
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vbo
Variovorax boronicumulans
Pathway
vbo01501
beta-Lactam resistance
vbo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CKY39_08455
01503 Cationic antimicrobial peptide (CAMP) resistance
CKY39_08455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vbo03036
]
CKY39_08455
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_08455
01504 Antimicrobial resistance genes [BR:
vbo01504
]
CKY39_08455
Chromosome and associated proteins [BR:
vbo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CKY39_08455
Transporters [BR:
vbo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CKY39_08455
Antimicrobial resistance genes [BR:
vbo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CKY39_08455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
HlyD_3
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
ATA53237
UniProt:
A0A250DFT9
LinkDB
All DBs
Position
complement(1867339..1868631)
Genome browser
AA seq
430 aa
AA seq
DB search
MELDGASPLHLWLSLLLPVHARPLCLPLRPAPHGPVHRRRPRGVLAHQCGGPGAAKAANA
PAKEVGIVTLKSEVLALSTELPGRTAAPVIAEIRPQVGGILKERLFTEGSQVKAGQVLYQ
LDPASLQAAHASAQASVRKAESALATARTVAKRNAELVKIDAISRQVFDETQAAEQQAEA
DLGVARAAEQTARIQLGYTRITSPITGWAELSTVTPGALVTANQAAAMTTVQQLDPIHVH
VTQSSSELLRLKRELASGRLQRASEAEARIQLLLEDGSPYPHAGRLTFSGVTVDAGTGSV
TLRAVVPNPDKLLMPGMYVRAVLQEGVNDAALLVPQQAVTRAPDGSASTLVIDAEDKVQK
RPIRIGRAIGTRWQVIDGLAAGDRVLMEGSQRVKVGDKVRTVDLGAKPAGTSVASATPDT
TSAASATVAR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
attgaactcgacggcgcgagcccgctccatctttggctttcgttacttctgcctgtccat
gcccgtccactttgcctcccgctccgccccgctcctcacggccctgtgcatcgccgccgc
cctcgcggggtgctcgcgcaccaatgtggaggccccggcgcggccaaggcggccaacgcc
ccggcaaaagaagtcggcatcgtcacactcaagtccgaggtgctggccctgagcaccgag
ctgcccggtcgcaccgcggccccggtgatcgccgagatccgcccgcaggtcggcggcatc
ctcaaggagcggctcttcaccgaaggctcgcaggtcaaggccggccaggtgctctaccag
ctcgaccccgcctcgctgcaggccgcccatgccagcgcgcaggccagcgtgcgcaaggcc
gagtcggccctggccacggcccgcaccgtggccaagcgcaatgccgagctggtgaagatc
gatgccatcagtcgccaggtgttcgacgagacccaggccgccgagcagcaggccgaggcc
gacctcggcgtggcccgcgccgccgagcagaccgcgcgcatccagctgggctacacgcgc
atcacctcgccgatcaccggctgggccgagctgtccaccgtcacgccgggcgcgctggtc
acagccaaccaggcggcggccatgaccaccgtgcagcagctcgacccgatccacgtgcac
gtcacgcagtccagcagcgagctgctgcgcctgaagcgcgagctggccagcggccggctg
cagcgcgccagcgaggccgaggcgcgcatccagctgctgctggaagacggcagcccctac
ccgcacgccgggcgcctcaccttcagcggcgtgacggtcgatgccggcaccggcagcgtc
acgctgcgcgccgtggtgcccaaccccgacaagctgctgatgcccggcatgtacgtgcgc
gccgtgctgcaggaaggcgtgaacgacgccgcgctgttggtgccgcagcaggccgtcacg
cgcgcgcccgacggcagcgcctccacgctggtgatcgacgccgaggacaaggtccagaag
cggcccatccgcatcggccgcgccatcggcacgcgctggcaagtcatcgacggcctggcc
gcgggcgatcgcgtgctcatggaaggctcgcagcgcgtgaaggtgggcgacaaggtgcgc
acggtcgacctgggcgcgaagccggccggcacctccgtcgcgagcgccacgcccgacacc
acgtcggccgcttccgccaccgtcgcgcgctga
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