Variovorax boronicumulans: CKY39_15455
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Entry
CKY39_15455 CDS
T05068
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vbo
Variovorax boronicumulans
Pathway
vbo01501
beta-Lactam resistance
vbo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CKY39_15455
01503 Cationic antimicrobial peptide (CAMP) resistance
CKY39_15455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vbo03036
]
CKY39_15455
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_15455
01504 Antimicrobial resistance genes [BR:
vbo01504
]
CKY39_15455
Chromosome and associated proteins [BR:
vbo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CKY39_15455
Transporters [BR:
vbo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CKY39_15455
Antimicrobial resistance genes [BR:
vbo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CKY39_15455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
Beta-barrel_RND_2
Biotin_lipoyl
RND-MFP_C
BSH_Fcp1
CzcB_C
BSH_YknX
BSH_CusB
BSH_CzcB
BSH_LcnD
HH_YBHG
Peptidase_M23
NQRA_N
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
ATA54454
UniProt:
A0A250DJL7
LinkDB
All DBs
Position
complement(3367295..3368479)
Genome browser
AA seq
394 aa
AA seq
DB search
MKTMKRSTLVLALLALIVVVGAGLWLTRKPADDKAAPAAKGPAQRPALTVSVAKPEATEL
TVTLAANGNVAAWQEAVIGSESNGLKLAEVRVNVGDTVKKGQVLAVFSPETVQADIAQAR
ASLAEARASAADAAGNAARARTLQATGALSQQQINQYQTTEQTAKARAEAAEAVLAAQQV
RGRNTQVLAPDDGVISARTATVGSVVGAGTELFRLIRQGRLEWRAEVTSAELGRVAVGTP
AFVVSASGAQVKGTVRSIAPTVDPQTRAALVYVDLPNVQQNTGVKAGMFARGDFELGRSS
APTVPQSAIVPRDGFNNVFTLLPDGRVAQLKVQTGRRLKDRVEITSALPEGVQIVVQGAG
FLNDGDLVRVVDATPAAASSATPAKAAASAPSPK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatgaagcgttccacccttgtcctcgcgctgctggcgctgatcgtcgtcgtt
ggcgcaggcctgtggctcacccgcaagccggccgacgacaaggccgcacccgccgcgaaa
ggccccgcgcagcgcccggcgctgaccgtctcggtcgccaaacccgaagccaccgagctg
acggtcacgctggccgccaacggcaacgtggcggcctggcaggaggccgtgatcggctcc
gaatcgaacggcctgaagctggccgaggtgcgcgtcaacgtgggcgacaccgtgaagaag
ggccaggtgctcgcggtgttctcgcccgagacggtgcaggccgacatcgcgcaggcgcgg
gcctcgctggccgaagcccgcgcctcggccgccgacgccgccggcaacgccgcgcgcgcc
cgcacgctgcaggccaccggcgcgctgagccagcagcagatcaaccagtaccagaccacc
gagcagaccgccaaggcacgcgccgaggcggccgaggccgtgctggccgcgcaacaggtg
cgcgggcgcaacacgcaggtgctggcacccgacgacggcgtgatctccgcgcgcaccgcc
acggtgggcagcgtggtgggcgccggcaccgagctgttccgcctgatccgccagggccgg
ctcgaatggcgcgccgaagtcacctcggccgagctgggccgcgtcgccgtgggcacgcca
gccttcgtggtcagcgccagcggcgcacaggtgaagggcaccgtgcgcagcatcgcgccc
acggtcgatccgcagacgcgcgcggcgctggtctacgtcgacctgcccaacgtgcagcag
aacaccggcgtgaaggccggcatgttcgcgcgcggcgacttcgaactcggccgcagctcc
gcgccgaccgtgccgcaaagcgcgatcgtgccgcgcgacggcttcaacaacgtcttcacg
ctgctgcccgacggccgcgtggcgcagctcaaggtgcagaccggccgccgcctgaaggac
cgcgtggagatcaccagcgccctgcccgagggcgtgcagatcgtggtgcagggcgcgggc
ttcctcaacgacggcgacctggtgcgcgtggtggacgccacgcccgcggccgcctcgtcc
gccaccccggcgaaggcagcggcctccgcgccttcgcccaagtaa
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