Variovorax boronicumulans: CKY39_25640
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Entry
CKY39_25640 CDS
T05068
Symbol
leuD
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00290
Valine, leucine and isoleucine biosynthesis
vbo00660
C5-Branched dibasic acid metabolism
vbo01100
Metabolic pathways
vbo01110
Biosynthesis of secondary metabolites
vbo01210
2-Oxocarboxylic acid metabolism
vbo01230
Biosynthesis of amino acids
Module
vbo_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
CKY39_25640 (leuD)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
CKY39_25640 (leuD)
Enzymes [BR:
vbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
CKY39_25640 (leuD)
4.2.1.35 (R)-2-methylmalate dehydratase
CKY39_25640 (leuD)
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Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ATA56242
UniProt:
A0A250DPQ8
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Position
5556166..5556816
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AA seq
216 aa
AA seq
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MQKFTVHKGLVAPMDRENVDTDAIIPKQFLKSIKKTGFGVNLFDEWRYLDAGFPGQDPAS
RKPNPDFVLNQPRYAGASVLLARKNFGCGSSREHAPWALDQYGFRAIIAPSYADIFFNNS
FKNGLLPIVLPESQVSQLFDEAFAFPGYTLTIDLERQVVVKPDGQEFAFDVQAFRKYCLI
NGLDDIGLTLRHKDKIKAFETERLAQKPWLAHTMIS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaattcaccgtgcacaagggcctcgtggcccccatggaccgcgagaacgtcgac
accgacgcgatcattcccaagcagttcctcaagtcgatcaagaagaccggcttcggcgtg
aacctgttcgacgagtggcgctacctggacgccggctttccgggccaggacccggccagc
cgcaagccgaaccccgacttcgtgctgaaccagccgcgctacgcgggcgcctcggtgctg
ctggcgcgcaagaacttcggctgcggctcgtcgcgcgagcacgcgccgtgggcactggac
cagtacggctttcgcgccatcattgcgccgagctacgccgacatcttcttcaacaacagc
ttcaagaacggcctgttgccgatcgtgctgcccgagtcgcaggtctcgcagctgttcgac
gaagccttcgccttcccgggctacacgctgaccatcgacctggaacgccaggtggtcgtg
aagcccgacggccaggagttcgcgttcgacgtgcaggccttccgcaagtactgcctgatc
aacgggctggacgacatcggcctgacgctgcgccacaaggacaagatcaaggccttcgag
accgagcgcctggcacagaagccctggctcgcgcacacgatgatctcgtga
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