Variovorax boronicumulans: CKY39_28495
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Entry
CKY39_28495 CDS
T05068
Symbol
dmpG
Name
(GenBank) 4-hydroxy-2-oxovalerate aldolase
KO
K18365
4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:
4.1.3.39
4.1.3.43
]
Organism
vbo
Variovorax boronicumulans
Pathway
vbo00362
Benzoate degradation
vbo00621
Dioxin degradation
vbo00622
Xylene degradation
vbo00984
Steroid degradation
vbo01100
Metabolic pathways
vbo01120
Microbial metabolism in diverse environments
vbo01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CKY39_28495 (dmpG)
00622 Xylene degradation
CKY39_28495 (dmpG)
00621 Dioxin degradation
CKY39_28495 (dmpG)
00984 Steroid degradation
CKY39_28495 (dmpG)
Enzymes [BR:
vbo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
CKY39_28495 (dmpG)
4.1.3.43 4-hydroxy-2-oxohexanoate aldolase
CKY39_28495 (dmpG)
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GFIT
Motif
Pfam:
HMGL-like
DmpG_comm
CLP_protease
Motif
Other DBs
NCBI-ProteinID:
ATA56725
UniProt:
A0A250DQS6
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All DBs
Position
complement(6177577..6178650)
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AA seq
357 aa
AA seq
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MTTTTNTNLKGRRVTLHDMTLRDGMHPKRHLMTLEQMTHIASGLDEAGVPLIEVTHGDGL
GGSSVNYGFPAHSDEAYLGAVIPLMKQAKVSALLIPGIGTVDHLRMAHGLGVHTVRVATH
CTEADVSEQHITMARRLDMDTVGFLMMAHMASPETLVRQALLMEGYGANCIYVTDSAGYM
LPDDVTARIGAVRAALQADTELGFHGHHNLAMGVANSVAAVAAGANRIDAAAAGLGAGAG
NTPMEVFVAVCDRMGIETGVDVFRIQDVAEDRVVPIMDHMIRVDRDSLTLGYAGVYSSFL
LFAKRAEKKYGVPAREILVELGRRGMVGGQEDMIEDTAITLARARQAVQQQQEGVAA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacgacgaacacgaatctgaagggccgccgcgtcaccctgcacgacatgaca
ctgcgcgacggcatgcaccccaagcgccacctgatgacgctcgaacagatgacgcacatc
gccagcgggctcgacgaagcgggcgtgccgctgatcgaagtgacgcacggcgacggcctg
ggcggcagctcggtcaactacggctttcccgcgcattccgacgaggcgtacctgggcgcc
gtgattccgctcatgaagcaggccaaggtgtcggccctgctgattcccggcatcggcacc
gtggaccacctgcgcatggcgcacggcttgggcgtgcacaccgtgcgcgtggccacgcac
tgcaccgaggccgacgtgtccgagcagcacatcaccatggcgcgccggctcgacatggac
acggttggctttctcatgatggcccacatggcctcgcccgagacgctggtgcgccaggca
ctgctcatggaaggctacggcgccaactgcatctacgtgaccgattcggcgggctacatg
ctgccggacgacgtcacagcgcgcatcggcgccgtgcgcgcggcgctccaggccgacacc
gagctgggctttcacggccaccacaacctcgcgatgggcgtggccaactcggtcgcggcc
gtcgcggccggtgccaaccgcatcgatgccgcagcagcgggcctgggcgcgggcgcgggc
aacacgccgatggaggtgttcgtggcggtgtgcgaccgcatgggcatcgagaccggcgtc
gacgtgttccgcatccaggacgtggccgaggaccgcgtggtgccgatcatggaccacatg
atccgcgtcgatcgcgactcgctcacgctgggctacgcgggcgtgtactcgagcttcctg
ctgttcgccaagcgcgccgagaagaagtacggcgtgcccgcgcgcgaaatcctggtggag
ctggggcggcgcggcatggtcggcgggcaggaagacatgatcgaagacacggccatcacg
ctggcccgcgcacgccaggccgtgcagcagcaacaggaaggagtggcggcatga
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