Variovorax boronicumulans: CKY39_29865
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Entry
CKY39_29865 CDS
T05068
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
vbo
Variovorax boronicumulans
Pathway
vbo01501
beta-Lactam resistance
vbo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vbo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CKY39_29865
01503 Cationic antimicrobial peptide (CAMP) resistance
CKY39_29865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vbo03036
]
CKY39_29865
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbo02000
]
CKY39_29865
01504 Antimicrobial resistance genes [BR:
vbo01504
]
CKY39_29865
Chromosome and associated proteins [BR:
vbo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CKY39_29865
Transporters [BR:
vbo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CKY39_29865
Antimicrobial resistance genes [BR:
vbo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CKY39_29865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
BSH_CusB
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
ATA56959
UniProt:
A0A250DSH8
LinkDB
All DBs
Position
6477128..6478423
Genome browser
AA seq
431 aa
AA seq
DB search
MPLLHVSRQPSLSFSPRLATVALVSLLFLAACGKSEAPAGPGGGGGGARPAPEVGVVTVK
PTDVGLVTELPGRLEASRIAQVRARTPGILLKREFREGSDVKAGQLLFRIDPAPLVAATQ
NAQAALARAEANAVQAKALADRYKPLVEANAVSKQEYATAVASAKTADADVAANRALLQT
AKINQGYADVTSPIAGRIGRALVTEGALVGQGDATELAVVQQINPLYVNFTQSASDVLKL
RRAVAAGQYKRASGEEAASIRVVLEDGTDYGQDGKLLFSDLTVDPTTGQVTLRAEIPNPK
GELLPGLYVRVKLEQAQVTNAITVPQQAVTRTQQGDHVTVVSADGKLSQRTVKISAAKDN
QWVVLDGLKAGEQVMVDGFQRLQMMPPGTPVKAVPWQKPTPNGAAAPAAPAASAAAAAPA
ASPASAPADKK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttctgcatgtctcgcgtcaaccgtccttgtcgttttcgccgcgtctcgcgacc
gtggccctcgtctcccttctgttcctggccgcctgcggcaagagcgaagccccggccggt
ccgggcggcggtggcggtggcgcccgtccggcgcctgaagtcggcgtggtgacggtcaag
cccaccgacgtgggcctcgtgaccgagctgcccggccgcctcgaagcctcgcgcatcgcc
caggtgcgcgcccgcaccccgggcatcctgctcaagcgcgagttccgcgaaggcagcgac
gtgaaggccggccagttgctgttccgcatcgacccggcaccgctggtggccgccacgcag
aacgcccaggcggctctggcccgcgccgaagccaacgccgtgcaggccaaggcgctggcc
gaccgctacaagccgctggtcgaggccaacgccgtgagcaagcaagaatacgcgacggcc
gtggcctccgccaagacggccgacgccgacgtggccgccaaccgcgcgctgctgcagacc
gccaagatcaaccagggctacgccgatgtcacctcgcccatcgcgggccgcatcggccgc
gcgctggtcaccgaaggcgcactggtcggccagggcgacgccaccgagctggccgtggtg
cagcagatcaacccgctgtacgtgaacttcacgcagtcggcctccgacgtgctcaagctg
cgccgcgccgtggccgccggccagtacaagcgtgcgagcggcgaagaagccgcgagcatc
cgcgtggtgctcgaagacggcaccgactacggacaggacggcaagctgctgttctccgac
ctcacggtcgacccgaccacgggccaggtcacgctgcgcgccgagatcccgaaccccaag
ggcgagctgctgcccggcctgtacgtgcgcgtgaagctcgagcaggcccaggtgacgaac
gcaatcacggtgccgcaacaggccgtcacgcgcacccagcagggcgaccacgtgacggtg
gtcagcgccgacggcaagctgagccagcgcaccgtgaagatcagcgccgccaaggacaac
cagtgggtggtgctcgacggcctgaaggccggcgaacaggtgatggtcgacggcttccag
cgcctgcagatgatgccgcccggcacgcccgtgaaggcagtgccgtggcagaagccgacg
ccgaacggcgcggctgcacccgcggcaccggcagcgtctgctgccgcagcggcacccgcc
gccagcccggcttcggccccggctgacaagaagtaa
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