Verrucomicrobia bacterium S94: EGM51_15780
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Entry
EGM51_15780 CDS
T05990
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
vbs
Verrucomicrobia bacterium S94
Pathway
vbs01501
beta-Lactam resistance
vbs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vbs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EGM51_15780
01503 Cationic antimicrobial peptide (CAMP) resistance
EGM51_15780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vbs02000
]
EGM51_15780
01504 Antimicrobial resistance genes [BR:
vbs01504
]
EGM51_15780
Transporters [BR:
vbs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EGM51_15780
Antimicrobial resistance genes [BR:
vbs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EGM51_15780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Tsp36_N
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QBG48788
LinkDB
All DBs
Position
3579037..3582102
Genome browser
AA seq
1021 aa
AA seq
DB search
MNLPRFSVRRPVFTTMVALILIVLGAVSLSRLQIDLLPSIELPTASVRTEYEGASPEVME
RLITQIIEEIVATVPGVEEIRSTSEEGRSSVNVTFVWGTDLDAAAIDLRATIEDEINELP
DDITRPRINKFNIDSFPVVLIGISSPLDPVELTQLIEDSIRHRFTQISGVAQVDLWGGFP
REIRVEIDPDKINALGLSLNHILDTLRDANLDLPAGQIEEGRYEVTLRAPAQFSSVQEIR
DTVLEMRGGAAVTVGDVAEVVDTYEKLTRIIRVNNERGIRIAIRKQSGANTVEVSRQILQ
EIDRLNAEFPQISIVPVINQGNFIERSIQNVARSVLYGGGLAILILLFFLRNIRSTLVIS
LSIPISIIATFSLIYFAGFTINLMTLGGLALGVGMMVDSSIVVLENIFRIRDEGGEPPAE
AAAVGAWEVASAITASTITTLVIFLPVVFVKGVSGLLFRELAYVIAFSLVCSLLLSLSLV
PMLSSRLLKRKGEDRIGPDWLERLKRDAERRFDKLNAGYLNLLNAALRHKTRVVFGAVAL
LGLSLFTVPMIGTEFLPPSDEGEVRVTGEMEVGTRLDLLDRQTRRMESIVYDAVPEAVST
VASVRENEGEIRMSLVKASERSRSNVEIAADLRERLEGRIPGMKIRTRAPQGQFLLERII
GGDEGVTVEIRGFELEVLKALSDKVAEAIEGIEGITDVDQSFDDGTPQVEFILDRRKIAD
LGFTPRDVTEVIETAIAGSRAGNYHSKGNSYRILVQLKDAEKRSLDEVLNLTLRTAGGET
VALRNLVTTISSRAPLEITRKDQQRQVTVTANVTGRDLGSVAADIKEKLRQIPRPDSYEL
MVAGNFEEQQKAMRELTVALLLSLLLVYMVLACQYESLLDPLVVMLSTPMAAIGVLLVLW
LTDTTMNLQSAIGCIMLGGIVVNNAILLVDQAGRLHEEGRSLNEAVAEAGRRRFRPILMT
TMTTILGLLPLALGIGEGADAQAPLARAVVGGLAGSTLITLVLIPVVYTLVHGVRNRKVK
V
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgccccggttcagtgtccgccgtcccgtctttacgacgatggttgctctgatt
ctgattgtgctcggtgcggtttcgctgagtcgcctgcagattgacctgctgccgagcatt
gagctgccgacggcgtctgttcgtacagaatatgaaggtgccagtccggaggtgatggag
cggctcatcacacagattatcgaagagatcgttgcgacggttcccggtgttgaggagatc
cgttccacttccgaggaggggcgcagttcggtgaatgtcacctttgtctggggcaccgat
ctggatgccgcggccatcgatttacgagctacgattgaggatgaaatcaatgaactgccc
gatgacataacgcgtccgcgcattaataaattcaacatagacagctttccggtagtgctg
attggcatctccagtccgctggatccggtggagctgacgcagctgattgaagatagcatc
cggcaccgtttcacgcagatttccggtgtggcgcaggtggatttgtggggcgggtttcct
cgcgaaatccgcgtggagattgatccggataaaatcaatgcgctgggtctttctctcaac
cacatactcgatacactgcgcgatgccaacctggatctgccggccggacagattgaagaa
gggcgttatgaggtgacgctgcgtgcaccggcgcagttcagcagtgtacaggagattcgt
gataccgtgctggaaatgcgcggcggcgcggcggtgaccgttggcgatgtggcggaagtg
gtcgatacctatgaaaaactgacacgtataatccgggtgaacaacgaacgcgggatacgc
attgcgatccggaagcagtcgggagccaatacggtcgaagtgtcgcggcagatcctgcag
gagattgaccggcttaacgccgagttcccgcagatcagcattgtgccggtgattaatcag
ggcaacttcatagagcgctccattcagaatgtggcgcgttcggtgctgtatggcggcggg
ctggcgattctgattctgctctttttcctgcgcaacatccgcagtacgctggtgatttcg
ctgtcaataccgatctcgattattgcgacattttcgctgatttattttgcagggttcacc
atcaacctgatgacgctcggcggtttggcgctgggggtgggcatgatggtggacagctcg
attgtcgtgcttgaaaatatattccgtatccgtgatgagggcggggagccgccggccgag
gcggcagcggtcggagcctgggaagtggcgtcggcgattacggcgagtacgattaccaca
ctggtgatttttctgcctgtggtgtttgtgaagggggtgtcgggcctgctgtttcgcgag
ctggcttatgtgattgcattttctctggtctgttcgctgctgctgtcgctgagtcttgtg
ccgatgctctcctcgcgcctgctgaaaagaaaaggggaggaccggatcggtccagactgg
cttgaacgcctgaagcgggatgccgagagacgattcgataaactgaatgcgggatacctg
aatctgctgaatgctgcgttgcggcataaaacacgggtggtgttcggtgctgtagcgctg
ctcggtctcagtctgtttaccgtgccgatgatcggaactgaatttctgccgccgagcgat
gagggagaggtgcgcgttaccggtgaaatggaagtgggtacgcggctggatctgctggat
cgacagacgcggcggatggaatcgattgtttatgacgctgtgccggaagcggtatcgacc
gtggcctcggtgcgtgagaatgaaggcgagatccggatgtcgctggtgaaggcgtcggag
cgttcccgttcgaatgtggaaattgcagccgatttgcgtgaacggctggagggccggatt
cccggtatgaaaatccggacccgtgcgccgcagggacagttcctgctggagcgtatcatt
ggcggtgatgagggagtcacggtggagatccgcggttttgaactggaggtgctcaaggcg
ctgtctgacaaagtggcggaggccattgaaggtatcgaaggcattactgatgtggaccag
agttttgatgacggaacgccgcaggtggaatttatcctggaccggcgtaagattgccgac
ctcgggtttacgccgcgcgatgtgaccgaagtgattgaaacggcgattgcgggatcgcgt
gccggaaattatcatagtaaggggaattcctaccgtattctggtgcagctgaaggatgcg
gaaaagcgatcgctcgacgaagtgctgaatctcacgttgcgtactgccggcggtgagacc
gtggctctgcgcaacctggtcaccacgatcagcagccgggctccgctggaaatcacccgg
aaggatcagcagcggcaggtgacggttactgctaacgtaacgggccgggatctgggttct
gtggctgcagatattaaagaaaagcttcgtcagattccccggcctgacagttatgagctg
atggtggccggaaattttgaagagcagcagaaggcgatgcgggaactgacagtggctttg
ctgctgtcgctgctgctggtgtatatggtgctggcgtgtcagtatgaaagtctgctcgat
ccgctggtggtgatgttgtcgaccccgatggccgcgatcggtgtgctgctggtgctgtgg
cttacggatacaaccatgaatctgcagtcggccatcggctgtattatgctcggcgggatt
gtggtgaacaacgcgattctgctggtggatcaggccgggcggctgcatgaagaggggcgt
tcgctgaacgaggcggttgccgaagccggccgccggcgtttccggcctattctgatgacg
acaatgacgactattctcggtctcctccctctggctctggggatcggtgaaggggccgat
gcccaggcaccgctggcccgggcggtggttggagggctggcgggatcgacgctgattacg
ctggtcttgattccggtcgtttacacgctggttcacggggtacgcaacaggaaggtgaaa
gtatga
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integrated database retrieval system
