Venturia canescens: 122410516
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Entry
122410516 CDS
T09386
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
vcan
Venturia canescens
Pathway
vcan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122410516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122410516
Enzymes [BR:
vcan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
122410516
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122410516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
122410516
NCBI-ProteinID:
XP_043274637
LinkDB
All DBs
Position
5:826363..828271
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AA seq
430 aa
AA seq
DB search
MSLALNKLKKRPPEELTVRSKKKVDRFDGLSEEEVQKCTLEDILEPNLDLVFVGINPSLM
AAHRGRYYAGPGNHFYKLLHASGLVPRFVSFEEDRKLLSYKIGLTNIVARPTRSSADLKK
HEIKEGSRTVREKLLIFEPKIAVFNGKCIYEVFADKTGKSDFNFGLQLEKVGETAVWVVP
SSSARCAHFPRMTDKLHFYTALKKYLSFLKGEISEVNLAEFRFEGKCKQKAATTSIMWRR
KNVSAFLGGGRVANKAALDVSEENIGALRGTEFVITEILTAAGDEENLESDKNSESVLGP
NFSDDRTSSSVEETISRESTTELSTIPLPKESDRNFPRSRGRKLPNGFPSPRLATSGSHD
SNGSTDFINVIKKRLAEKKTNPRGSEEKTLETAVKRHREGKKLKYENLGLKRAKKKLDSH
TSACETLSEM
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggctttgaataaattgaagaaacgaccgccggaagaactgacagttaggtca
aagaaaaaagtggaccgattcgacggtttgtcagaagaagaggtacagaaatgcacgtta
gaggacattttagaacccaatttggatcttgttttcgtgggtataaatccgagcttgatg
gcagctcacagaggaagatattatgccgggccaggaaatcatttttacaagctcttacac
gcatctggactagttcccagattcgtaagttttgaagaggatagaaaattactaagctac
aaaataggattgacaaacattgtggctcgtcctacaagatcctcggctgatttgaaaaag
cacgagatcaaagaaggctcgaggacagtgagagaaaaactgctaatattcgagccaaaa
attgcagttttcaatggaaaatgtatatacgaagtatttgccgacaaaacaggaaaatca
gacttcaattttggtcttcaattggaaaaagttggagaaacggcagtttgggtcgttcct
tccagcagcgcgcgttgtgctcatttcccccggatgaccgacaagctgcacttttatacg
gcgctgaaaaaatatcttagttttctcaagggtgaaatatccgaggtgaatttagcggag
tttcgattcgagggaaagtgcaaacaaaaagcagctaccacttcaataatgtggagacgg
aaaaatgtctccgcgtttttaggcggcggcagagtcgccaacaaagccgccctcgatgtc
tctgaagagaatatcggggcgttaagaggcaccgaatttgtcattactgagattctcact
gccgccggtgacgaggaaaatcttgagtccgataagaattccgaaagcgtcctcgggcca
aatttttccgacgatagaacttcgagttcggtcgaagaaacaatcagtcgggaatcaaca
acggagctttcgacgattccgttgccaaaagaaagtgatcgaaattttccacgatcccgc
ggtcgaaaactcccaaacggatttccatccccgcggctcgctacatccggatctcacgat
agcaacggttccacggattttataaatgtgataaagaaaaggttggccgaaaaaaaaacg
aatcctcgcggatcggaggaaaaaacattggaaaccgccgttaagcgtcatcgggaaggt
aaaaaactcaaatacgaaaatctcggactcaagagggccaaaaaaaagctcgactcccat
acaagtgcatgcgaaactttgtctgaaatgtaa
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