Venturia canescens: 122410635
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Entry
122410635 CDS
T09386
Name
(RefSeq) integrator complex subunit 4
KO
K13141
integrator complex subunit 4
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122410635
Spliceosome [BR:
vcan03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
122410635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS4_8HBD
HEAT
Cnd1
HEAT_2
Adaptin_N
DNA_alkylation
SCD
PDS5
Lant_dehydr_C
Motif
Other DBs
NCBI-GeneID:
122410635
NCBI-ProteinID:
XP_043274858
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All DBs
Position
5:13761428..13765594
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AA seq
914 aa
AA seq
DB search
MALIKKRVLAEFSQTQVIGEPPIKRQRLLRLPSSGSSRNGVGSDGSSALAFIECLEKCKG
GNDSLQLLVRISDTVTRMATEDVPVAVTKLLERFSIESEAAVRAKILWVLAELGEITDDL
LEKTRIVDETAKLLRNEESHRVKSQGLATLLKLGNHNRTAVLKIAREHLPDTWHGVQTRC
LSIIGRYLSSTAAEETLILVGNYARSQDPRVRASAFETMAELHTQRGCRLPPNFFSEACS
AVRDDYEIVRRAVLRLIWILGTEYPDNIIAGEDGEDVRMIDCAFSKMCGLMGDLSPRVRA
SVMSLLGEMKGVSRRYIEQALDKKQKRVEDEGSEIEERSGSCGAFIHGLEDEFLEVRTAA
VEALCRLSLEQPCIARISLEFMVDMFNDEIQDVRIRAIESLRKMSASVTLQEDQLETILC
ALEDFSDSVREGLHATLAASRLATRNCLHMCVNRLIDNLTRYPQDKDSIRSCLAALGASH
PYLTLPLVPQLLGRHPFFDTPEPDVDEPSYASVLVLIFNAALHCPSMHALFSEHAAKHYH
YLRDTMPHLVPRLRPVLAKGLDTRKQNDEDEETRDRRGREFLERMVAGVEAARPGGRVHT
QLLEAAAVDLDRLAEMDRRMEGAAHFTALYIRCLLLLKNVIKELSENQTNSSISSFSPNS
TSNIAVLLRHAQKLQRLFTGVDETEIALANDVWLKALAVELIRITRSATGSALPLARHFL
AEADALPEDTSNLPPFSRALLQIPSLGEAKPGSLSRLLLPLLTSIPQPGEERLPRPSAST
RLCRAIIEEPRGDADAALKFTGGLLLGIPLTAKILNLRDPETLRIKIRHPDQQVQLLLPR
KADLRLQNPEGMDYRLRTTVLLSHQVWMEACNVEISIALLVPSTNHSPTDDPCVIDLSKP
TKVSIAPKPIKRGI
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggctctcattaaaaaaagggttttagcagaattcagtcaaacacaagttataggtgaa
cctcctataaagaggcagcgtttattgcgacttccgtcgagtggaagtagcagaaatgga
gttgggagtgacgggagttcagctttggcattcatcgagtgtcttgaaaaatgcaagggt
ggtaatgattctctccaattgctcgtcagaatatctgataccgttactcgcatggcaacc
gaagatgtgccggttgcagtgacaaaactcttagagagattttccattgaatcggaagct
gctgtcagagctaaaattctctgggttctggcagaacttggtgaaataactgacgatctt
cttgaaaaaacaagaatagtcgacgagactgcaaaattgttgagaaatgaagaatcacac
agagtaaaaagtcagggtttagcgactttgctcaaactggggaatcataatagaacggca
gtactgaaaatagcacgagaacatttaccggacacgtggcatggtgtacaaactcgctgt
ttatcgataatcggtcgatatttatcgtcaacagcagcggaggaaacattaatattggta
ggaaattacgcaagatcacaggatcctcgtgttcgagcgagtgcttttgaaacgatggca
gaattgcatacacagcgaggttgcaggcttccgccaaattttttttccgaggcttgtagc
gcggtgcgtgacgattacgagatcgtgaggagagcagttttgcgtttaatatggatattg
ggtacggagtacccggacaatataattgccggagaggacggtgaagacgtgagaatgata
gattgcgcattttcgaagatgtgtggattaatgggtgacttatcgccgcgagtgcgagct
tcggtgatgtcgttgttgggcgaaatgaagggagtatcccgtcgatacatcgagcaagct
ttggacaaaaagcaaaaaagggtggaggacgagggttcggagattgaggaacggagtggt
tcctgcggagctttcattcacggtctcgaggatgaatttctcgaagtaagaaccgccgcg
gttgaggcattgtgcaggttgtcgctcgagcagccttgcatcgccagaatatctttggaa
ttcatggtagacatgttcaacgatgagattcaagacgttcgcatacgcgcgattgaatca
ttgagaaaaatgtctgcaagtgtgactctgcaggaagatcagctggagactattctctgc
gctctcgaggatttctccgacagcgtcagagaaggtttgcatgctactttagccgcgagt
cgcttagcaacgagaaattgtttgcacatgtgtgtcaatcgcttgatcgacaatttgact
agatatccacaggacaaagacagcatcagaagttgtctggctgcgttaggagcgtcccat
ccctacctgactttgccgctcgtgccgcaactcctaggacgtcatccttttttcgacaca
cccgagcccgacgtcgacgaaccttcttacgccagcgtcctcgtcctcatcttcaacgct
gctctccactgtcccagcatgcacgcacttttctctgaacacgcggccaaacattaccat
tatttgagggacaccatgcctcatttagtccctcggctcagaccggttcttgccaaaggt
ctcgacaccagaaagcaaaatgacgaagacgaggaaactcgggatagacgaggacgcgaa
tttttagaacgaatggtcgctggcgtcgaagctgcgagacccggtggacgcgttcacacc
caactcttggaagccgccgctgtcgatctcgatcgactcgctgaaatggacaggagaatg
gaaggagctgctcatttcactgctctctacattcgctgccttcttttactcaaaaatgtc
atcaaagaactttccgagaaccaaacgaactcgtcaatatccagcttctcgcctaattcc
accagcaatatcgctgttcttctcagacatgcccagaaattacaacgtttgttcacgggt
gttgacgaaacggagatagcattagcgaacgatgtttggctgaaggccctggccgtggaa
ttgataaggatcacgagaagcgcaaccgggagtgcgttgcccttagcgaggcatttcctt
gccgaagctgacgcacttccggaggacacgtccaacttgccaccgttctcacgagctctt
cttcagattccttcgctcggtgaagcaaaaccaggatcattgtcgcgtcttctattacca
ctattgacgagcatcccgcagcctggagaagaacgacttccaaggccatccgcttcgacg
cgtttgtgtcgagcgataatcgaggagccgcgaggcgacgccgacgccgcacttaaattt
actggtggacttttactcggaattccattgaccgcaaaaattttaaatctccgggatcct
gaaaccctccgcattaaaataaggcaccctgaccagcaagttcaacttttattaccacga
aaagctgaccttcgacttcaaaatcctgaaggaatggattacaggctcagaacgactgtt
cttttgtcccaccaggtttggatggaagcctgcaacgttgaaatatcgatcgcgctcttg
gtaccatccactaatcattcaccgaccgacgatccttgcgttatcgacttgagcaaaccg
accaaagtgtccatcgcacccaaaccaataaaacgtggaatttaa
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