Venturia canescens: 122414880
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Entry
122414880 CDS
T09386
Name
(RefSeq) RING-box protein 1A
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
vcan
Venturia canescens
Pathway
vcan03420
Nucleotide excision repair
vcan04120
Ubiquitin mediated proteolysis
vcan04141
Protein processing in endoplasmic reticulum
vcan04310
Wnt signaling pathway
vcan04341
Hedgehog signaling pathway - fly
vcan04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122414880
04120 Ubiquitin mediated proteolysis
122414880
09124 Replication and repair
03420 Nucleotide excision repair
122414880
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122414880
04341 Hedgehog signaling pathway - fly
122414880
04350 TGF-beta signaling pathway
122414880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcan04121
]
122414880
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122414880
Enzymes [BR:
vcan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
122414880
Ubiquitin system [BR:
vcan04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122414880
Multi subunit type E3
SCF complex
Ring finger protein
122414880
Cul2 complex
122414880
Cul3 complex
122414880
Cul4 complex
122414880
Cul7 complex
122414880
Cul8 complex
122414880
Cul9 complex
122414880
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122414880
TCR (transcription coupled repair) factors
Cul4-CSA complex
122414880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
122414880
NCBI-ProteinID:
XP_043282464
LinkDB
All DBs
Position
1:10487612..10490550
Genome browser
AA seq
113 aa
AA seq
DB search
MASAMDIDDEGSDLPTSGSTKGDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctatggatattgacgacgaaggcagtgatttacccacttcgggcagcaca
aaaggcgataaaaagcgattcgaagtgaaaaagtggaatgccgttgctctctgggcttgg
gatatcgtggttgacaactgcgcaatctgtaggaatcacataatggatctctgtatcgaa
tgtcaggcgaatcaggcttcagcaacgagcgaagagtgcaccgtcgcttggggagtttgc
aaccatgcattccatttccattgcatctcacgttggctcaagactaggcaagtctgtcca
ctggacaaccgtgagtgggagttccaaaagtatgggcactaa
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