Varibaculum cambriense: CYK25_003685
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Entry
CYK25_003685 CDS
T09090
Symbol
dop
Name
(GenBank) depupylase/deamidase Dop
KO
K20814
Pup amidohydrolase [EC:
3.5.1.119
]
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
vcb03051
]
CYK25_003685 (dop)
Enzymes [BR:
vcb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.119 Pup amidohydrolase
CYK25_003685 (dop)
Proteasome [BR:
vcb03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CYK25_003685 (dop)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Big_4
Motif
Other DBs
NCBI-ProteinID:
WIK89288
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All DBs
Position
805759..807360
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AA seq
533 aa
AA seq
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MNESAIKRPLGTETEFGIIQVGNVYANPVALSTQVVAAYRDHSRPSEAVTWDYEGENPLQ
DMRGFSLNPREADPSQLTNNPEQLAPSGPGVQAVARPSAQEAALPKPSACVLTNGARLYV
DHAHPEYSSPETLGPKQGALYDAAGDLVARRAMELAAASGNQIELFKNNVDGKGAAYGSH
ENYLLRRDLEFFGLAQNLIPFLVTRPIICGAGRVGIGQRSEKSGFQISQRADYVENDIGL
ETTFNRPIVNTRDEPHADASRWRRLHVIGGDANRFQYSTYLRLGSTAALLWLLENPDCPQ
VKQLEELRITSDPVEETWAVSHDLSLTHRIETVSGPLSALQIQNAIRVAIAEALEERGGA
DEASAELLKDWQQVLDSLATDRQLAARRVEWVGKYELLARMRQRLGCDWSHPKIQALDLQ
WAALRPGIFENLCASGMVEQLFSVEEVAQAVSLPPRGGRSWVRGMAVANLPEVKKGSWES
LLLDLGGEQLLRFSLGDPARPASPAEARALENGDAAAFVRALSGEKEKPAEKF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaaagcgccattaagcgaccgttgggaactgaaactgagttcgggattatccaa
gtaggaaacgtctacgccaacccggttgcactttctacccaagtggtggcggcctaccgg
gatcactctcggccgtcagaagccgttacctgggattatgagggtgaaaatcccttgcaa
gatatgcgaggattttcgcttaatccccgggaggcagacccttcacagctcaccaataat
cccgagcagctggcgccttccggcccgggagtacaggcggttgcccgtcctagcgcccaa
gaggccgcgttacccaaacccagcgcctgtgtactgactaatggcgcccgcctgtacgtg
gatcatgcccacccggaatattcctctccggaaactctaggtcccaagcaaggggcactc
tatgatgcggccggagatctggttgcccgccgcgccatggaactggcagcagcaagtggt
aaccagattgaacttttcaaaaacaatgtggatggtaaaggcgcggcctacggcagtcat
gaaaactatttattgcggcgcgacctagaattttttggtcttgcccaaaatctgattccc
ttcctagtcacccggccaattatttgcggagctggacgcgtcggtatcggacagcgctcc
gaaaaatcaggtttccagatttcgcaacgcgctgactatgtggaaaacgatattgggcta
gaaactacttttaaccggccgatagttaatacccgcgatgaaccccatgcggatgctagc
cggtggcggcgcctccacgttattggtggggacgcgaatcgtttccaatactcgacttac
ctgcgtttaggctctactgccgctttgctgtggctattggaaaatccggattgtccccag
gtaaaacagctggaagagttgcgaattacttccgatccggtagaggaaacctgggcggta
tcgcatgatctttcccttactcaccgtatcgaaacggtatcgggaccgctgagcgccctc
cagattcaaaacgccatccgagtcgctattgccgaggccttagaagagcgcggcggggca
gacgaggctagcgccgagctgcttaaagactggcagcaggtgctagattctttggccacc
gaccggcagctggccgcccgccgggtggaatgggtagggaaatatgaacttttagcacga
atgcggcagcgtctaggttgcgattggagccaccccaaaattcaggcgctagatttgcag
tgggcggcgctgcgaccaggaatattcgaaaatctttgtgcctccggaatggtggagcaa
ctgttttcagtggaagaagtagcgcaagcggtttccctgcctcctcgtgggggtagatcc
tgggtgcgggggatggcggtagctaaccttccggaagttaagaaaggctcctgggaatcg
ctactcctagatttaggaggggagcagcttttgcgcttcagcttaggggatccggctcgc
cccgcctccccagccgaagcgcgcgccctcgaaaatggtgatgcagccgcttttgtccgt
gcccttagcggagaaaaggaaaaaccggcagaaaaattttag
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