KEGG   Vanessa cardui (painted lady): 124543281
Entry
124543281         CDS       T09161                                 
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
vcd  Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:vcd03037]
    124543281
Cilium and associated proteins [BR:vcd03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   124543281
SSDB
Motif
Pfam: Beta-prop_IFT122_2nd Beta-prop_IFT122_1st Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 ANAPC4_WD40 Zn_ribbon_IFT122_C Beta-prop_CAF1B_HIR1 B-prop_COPA_B_2nd Beta-prop_IFT140_1st WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_NUP159_NUP214 EIF3I Zn_ribbon_IFT122 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N eIF2A WDR90_beta-prop_4th TPR_GEMI5 PROPPIN Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Nic96 Beta-prop_HPS5 Beta-prop_Vps41 TPR_COPA_B Beta-prop_WDR75_2nd CFAP43_N Beta-prop_WDR75_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 124543281
NCBI-ProteinID: XP_046977398
LinkDB
Position
Z:complement(11822771..11850012)
AA seq 1181 aa
MRTIPKWVNKIHEADKIEFSSVHAICFSPDGTQLIVGAGEKVMVYDPRDGALVQLLQAHK
GAVHAVSYCNDGKKFASGSADKNVIIWTSKMEGVLKYSHNEAIQCLAYNPVTYHLASCAL
SDFAFWSADVKAVQKYRVNGRITSCAWSPTGQHLAIGLANGGVSIRNKLGEEIQKIIRDA
AVWAVTFLKQTLLITDWNDTLSFYDIQGQQVLKERNIELSALSITTLGALVLVGGIGGWS
VLTSEGVLIVSTPVEWVWSVAPSHSQNSMAVACQDGTLWCYQVAYSTVHGLYRERYAYRE
NMTDIIIQHLTSGNKVRIKCHDRVQKIAIYKHRLAVQLPERVVVYEQGDLEGMLYRVKEK
LIQRNECSLLVATSEALLICQDTKLSMIGSKLPKSWTVPAPIRYVKVTTLQLEEVLLLGL
FNGQIWQVEPASGVAKVILQSPGNVRCLDVNASRSRLAVVDEASVCRVYSLANGELLYTE
ENVTAVSWNSWCDELLCLSGGGLLSIKAAHFAAATQPLTGSVVGFQGGRVFCLQANSMQT
VNVPLSHAVHQYIQQKLFNDAYAVACLGVTALDWERLGTAALEELSFEVARKAFQRSENI
TYLTLIDQLQERIENGEKPAVIAGEVVAHLGRYTEAARMFHSAARDDRALALYLDLRMFN
KAQEYVSEGDGLTNLARQRAEWARRVNEPRAAAEMYLAAGDVHKAARLLAESGRRDMLIE
LARKMDKGSSESLRHVAEALVAVGEYGTAGDVYQRLGDFKKVAQLAVIAGEWSRAFNLAR
EHADCKQDVYLPYAHRMAQEKKFVEAQKAYHMAGETATAMRVFNVLVGNAVTEERFSDAG
YLHHLLASQCLESAATADRDRDKLLHQYRQYDRLARVYHAYDAVHRCVHEPFSLSQPETL
LNAARYVLALLDGDPPAGVSMFCLYLCLAKQAKVLNANTLARQMLDKILGLQVPPKFQEG
VELLMLKSGGVTDTSGEEDVAPLCWRCRRHVPPLANQCPRCRHNLAYSLATHEVLPLVQF
EPTEGITEAEAMDLIERMPIPEVEKNHTEGADILRIDNDIDYSDPFLDKVEEEDEGVVEC
SRLALLRLNPACAVVVRRAPLPPLYYRNMLPELPVTTCPSCHNLFYMEDYEIQVVTKGHC
PFCRQPSQEIRNFEDSREGSLTNDIESPTPRSPSNGDVSWQ
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgaggactatcccgaaatgggtaaataaaattcacgaagccgataaaattgaattttcg
agtgttcatgcaatatgctttagtccagatgggacccaattaattgttggagcaggagag
aaggtaatggtgtacgaccccagagatggagcccttgttcaacttttacaagctcataaa
ggtgccgttcatgcagtgtcatactgtaatgacggtaagaaatttgctagtgggagcgct
gataaaaatgttataatatggacatctaaaatggagggtgttcttaaatattcgcacaat
gaagcaattcaatgcttagcttataatccagtaacatatcacttggcatcatgtgcatta
tcagattttgcattctggtcagctgacgtaaaagcagtccaaaagtatagagtcaacggt
cgtattacaagctgtgcatggtctccgactggacaacatttagctataggattggctaat
ggaggagtatccatacgcaacaagttaggtgaagaaatacagaaaataatacgagatgct
gcagtgtgggccgtcactttcttaaaacaaactcttttaatcaccgactggaatgacact
ctatctttctatgatattcaaggtcaacaagttttaaaagaaagaaatattgagttatca
gcgttgtcaataacaacactaggtgctttagttttggtaggtggcattggaggttggtca
gtgctaacttctgaaggggttttaatagtctccacacctgttgaatgggtgtggtctgtt
gcgccctcacattctcagaattctatggcagtagcttgtcaagatggaaccctgtggtgt
tatcaagtagcatatagtacagtacatggattgtaccgtgaacggtatgcctacagagag
aacatgacagatattatcatacaacacttaacctctggaaataaagttcggattaagtgt
catgatagagtgcagaaaatagccatctataaacaccgtttagcagtgcaattaccggag
cgagtagtggtgtatgaacaaggtgacttggaaggtatgctttacagagttaaggaaaaa
ctcatacaaaggaatgagtgctcactgttggtcgctaccagtgaagctttacttatatgc
caggacacaaagctttctatgatcggttcaaagctacctaagtcatggactgttcccgct
cctatccgttatgtcaaagtaacgactttacaactggaagaggttttactattaggattg
tttaacggacaaatatggcaagtggaaccagccagcggggttgcgaaggtaatcctgcaa
agtcccggtaacgtccgctgcctcgatgtgaatgcgtcgcgcagtcgcctggctgtcgtc
gacgaggcctcagtctgccgcgtgtacagcttggcgaatggcgaactcctttacacggaa
gaaaatgtaacagcggtttcttggaattcgtggtgtgacgaactcctgtgtctctcgggc
ggcggactgttgtctataaaagcagctcacttcgccgccgccacacaacctttaaccggc
tctgttgtaggattccagggaggccgagtgttctgcttacaagctaactctatgcaaact
gtaaatgtgccactttcacatgccgtgcaccaatatatacaacaaaaattattcaatgat
gcgtatgcagtagcttgcttgggtgtgacggccttagactgggagcgactcggcactgca
gccttggaggagttgtctttcgaagtggcgcgcaaagcgttccagcgcagcgagaacatc
acatacctcacgctcattgatcaactgcaggagcgtatcgaaaatggcgagaagcctgcc
gtcatagcgggcgaggtggtcgcgcacctcgggcggtacacggaggctgcgcgcatgttc
cacagcgcggcgagggacgaccgcgcattggccctctatctcgacttgcgcatgtttaat
aaagctcaggagtacgtgagcgagggtgatgggttgacgaatctggcgcgtcagcgtgcg
gagtgggcgcgtcgcgtgaacgagccgcgcgccgccgccgagatgtacctcgccgcgggc
gacgtgcacaaggcagccaggctgcttgccgagagcggccgccgggacatgttaatagag
cttgcgaggaagatggacaagggttcaagcgagtctctgcgtcatgtagcggaagcctta
gtcgctgttggggagtatggcaccgctggtgatgtctaccagagactcggagatttcaag
aaagtcgcccaactggccgttatagcgggcgagtggtctcgagcattcaacctcgctcgt
gaacacgccgactgcaaacaggacgtatatttaccgtacgcccatcgcatggctcaagag
aaaaagttcgttgaagcacagaaagcgtatcacatggccggcgaaactgcaactgccatg
cgcgtcttcaatgtactcgtggggaacgcggtgactgaggaacgcttcagcgacgccggc
tacttgcaccacttactcgcatctcagtgcctcgaatcggctgcgacagcggacagggat
cgcgataagctgctgcaccagtacaggcagtacgaccgcctggctcgtgtgtaccacgcc
tacgacgccgtgcatcgctgcgtgcacgagccgttttccctgtcgcagccggagacgtta
ctcaacgcggcgcgctacgtgctcgcactactcgacggcgacccgcccgctggcgtatct
atgttttgcttatacctgtgtttggctaaacaagctaaagtcctcaatgccaatacgttg
gctcggcaaatgttagataaaattttaggtctgcaagtgccacccaaattccaggaaggt
gtggaactgttgatgctaaagagcggcggcgttacggacaccagcggcgaggaagacgtc
gcgccactgtgctggcgatgtcgtcgtcacgtaccgccactggcaaatcagtgtccgcga
tgtagacacaacttagcttactccttagctacgcatgaggttctgccgctggttcaattc
gagcccacagagggcatcactgaagcggaggcgatggatcttatcgaacgcatgcccata
ccagaagtcgagaagaaccatacggaaggtgctgatattctacggatagataacgacatc
gactattcggatccgttcctggataaagttgaggaggaagacgaaggtgtggtagagtgc
agtcggctcgcgcttctccgactcaacccggcctgcgcggtggtggtgagacgagcgccg
ctaccacccctctactaccgcaacatgctgcccgaactgccggtcaccacctgtccctcc
tgtcataacttgttctatatggaggactacgaaatacaagtagttacgaagggtcactgt
ccattctgtagacaaccgtcgcaagaaataaggaacttcgaggacagtagagaaggctcg
ctgacgaacgacatcgaatctccgacaccccgcagccccagcaatggagacgtctcgtgg
caatag

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