Vibrio cholerae O1 El Tor FJ147: IR04_04075 Help Entry IR04_04075        CDS       T03827                                  Symbol rumB Name (GenBank) 23S rRNA methyltransferase   KO K03212   23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] Organism vcf  Vibrio cholerae O1 El Tor FJ147 Brite KEGG Orthology (KO) [BR:vcf00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:vcf03009]     IR04_04075 (rumB) Enzymes [BR:vcf01000]  2. Transferases   2.1  Transferring one-carbon groups    2.1.1  Methyltransferases     2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase      IR04_04075 (rumB) Ribosome biogenesis [BR:vcf03009]  Prokaryotic type   rRNA modification factors    23S rRNA modification factors     IR04_04075 (rumB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_15 Methyltransf_25 Cons_hypoth95 Methyltransf_4 TRM5-TYW2_MTfase Methyltransf_32 Methyltransf_12 TehB Methyltransf_11 Motif Other DBs NCBI-ProteinID:  AJZ98398 LinkDB All DBs Position II:complement(856188..857315) Genome browser AA seq 375 aa AA seqDB search MQCEFFIQKRCTSCHLCAQPYSEQVTNKDQQLRELIAPATDVQWLPPVTSADTAFRNKAK MVVLGAAHAPILGIEDAQGQPLSLVTCPLYPQPMQELLAYLENWIRIAGIPPYNKLKKKG ELKFILLTRSENSGQFMLRFVARSHAVLERIERNLPTLIAAFPMIEVISVNIQPVHMARL EGEEEIFLTETQSLLEHFNDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDL FCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSA PELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAELSSYQMIRVQWFDMF PHTDHAEVLTLLVRK NT seq 1128 nt NT seq  +upstreamnt  +downstreamnt atgcagtgtgagttctttattcaaaaacggtgtacctcttgccacctatgtgcgcagccg tattccgagcaggttacgaataaagatcagcagttgcgcgagttgattgcgccagccacg gatgtgcagtggttaccccctgtcaccagtgctgacaccgcgtttcgcaataaagccaaa atggtggtgcttggtgcggctcacgcgccgattttaggcattgaagatgcgcaaggtcag cctttgtcgctagtgacttgcccgctttatccgcagccgatgcaagagctgctcgcttat ctggaaaactggatccgcattgcgggtattccaccctataacaagctgaagaaaaaaggt gagctgaagtttattctgctcacccgcagtgaaaacagcggccaatttatgctgcgtttt gtggcgcgcagccatgcggtgcttgagcgaattgaacgcaatttgccaacattgatcgca gctttcccgatgatcgaagtcatttccgtcaatatccagccggtgcatatggcgcgttta gaaggcgaagaggaaattttcctcaccgaaacccaaagcctgcttgaacacttcaacgat gtgcctatggtgatccgcccgaaaagctttttccaaaccaaccccaaagtggctgagcag ctatacgcgaccgcacgtacttgggtgcgcgagattgcgccaacgcaaatgtgggatctg ttttgtggcgtcggtggctttgcgctgcattgcgccgcgccagacactgctgtgacgggc attgaaattgaaccagaagcgattgccagcgcgcaacgttcggcgcaaatgatggggatt gataatctcagctttgcagcgctcgattctgccaagttttcacaaagccagatgagtgcg ccagagttagtgttggtcaaccctccacgtcgtggtttgggcagcgaactgaccgcgcaa ttggaagcgctcgcaccaaaatacattctttattccagctgtaacccgcaaactatggtt aaagacatcgctgagctttccagttaccaaatgattcgcgtgcagtggtttgatatgttc ccgcatacagatcacgctgaagtgctgaccttgttggtcagaaaatag

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