Vibrio cholerae O1 El Tor FJ147: IR04_12680
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Entry
IR04_12680 CDS
T03827
Symbol
rlmL
Name
(GenBank) 23S rRNA methyltransferase
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcf03009
]
IR04_12680 (rlmL)
Enzymes [BR:
vcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
IR04_12680 (rlmL)
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
IR04_12680 (rlmL)
Ribosome biogenesis [BR:
vcf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IR04_12680 (rlmL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
Cons_hypoth95
RlmL_1st
Methyltransf_31
THUMP
Methyltransf_25
Methyltransf_11
Methyltransf_15
PrmA
Methyltransf_18
N6_Mtase
Motif
Other DBs
NCBI-ProteinID:
AJZ99974
LinkDB
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Position
I:complement(1676501..1678627)
Genome browser
AA seq
708 aa
AA seq
DB search
MNQYLAVTSNGLENLLVEELTQLGINDAKPVQAGVKFKATNEQIYRCCLWSRLASRFVRI
VAEFKCQNDLDLYLSTTSVNWVNYFHSSKKLVVDFNGTNREIRNSQYGAMKVKDAIVDCF
TKKNLPRPSISKDLADLHIHVRLHKENALLGIDMVGSGLHARGYRTEAGKAPLRETLAAA
IILRSGWDASKPLLDPMCGSGTLLIEAAMMAANIAPGLQRKKWGFEALEDFEPELWASVK
SEASVQGKRGVKKVETHFYGVDNDNRVLQTAKDNARRAGVEELISFTLGDAAKVKRPENF
AEGIVICNPPYGERLGTHPGLIALYTAFGAQLKAEFGGCHASIFSSSDELLSCLRMRADK
QFKLNNGALPCHQKNYTIAMREQNSVSNEGTQEILIAPDFANRLKKNFNKIGKWAKREGL
DCFRLYDADLPEYNVAIDVYQDHLMIQEYAAPKDIPEEKAKRRLTDIIRAAIQVLDVDAN
NVVLKVRERQKGTSQYEKLGQQAQTMQITEYGVKLIVNLYDYLDTGLFLDHKITRRRLGQ
MAQGKDFLNLFAYTGSATVHAACGGAKSTTTVDMSKTYLEWAKENMQLNGQVGRQHQYVQ
ADCLQWLANAQSQYDLIFIDPPTFSNSKRMEQTFDVQRDHVTLMTNLKRLLRPEGTIVFS
NNKRHFKMDMEALHALGLNAQNISHQTLPLDFERNKQIHNCWLITHQS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtatctagcggtgacgtctaacggccttgagaatctattagttgaagaatta
acccaactgggtattaacgatgccaaacccgttcaggccggggttaaatttaaagcaacc
aatgaacagatctatcgctgctgtctatggagtcgtctcgcatcaagatttgttcgtatt
gtggctgaatttaagtgtcagaatgacttagatctctatctttcaacaacttcagtcaac
tgggtcaactatttccacagttctaaaaagctcgttgttgatttcaatggcacgaaccga
gaaattcgtaatagccaatacggcgcgatgaaagtcaaagacgccatcgtagattgcttc
actaagaaaaatcttccgcgtccgtcgatcagcaaagatcttgcggatcttcatatccat
gtccgcttacacaaagagaatgctctgcttggtatcgatatggtgggttcaggcttgcat
gctcggggctaccgaactgaagcaggtaaagcgccattacgtgaaacattagccgccgca
atcattctgcgcagtggttgggatgccagtaaaccgcttctcgatcctatgtgtggctcc
ggtaccttactgattgaagcggcgatgatggctgccaatattgctccaggcttacaacgt
aaaaagtggggcttcgaagcattagaagatttcgaaccagaactctgggcaagtgtgaaa
tcagaagccagcgtgcaaggtaaacgtggagtcaaaaaggtagaaactcatttctacggc
gtagataacgataaccgcgtattgcagacggctaaagataacgcccgccgtgccggtgta
gaagagctaatcagctttaccttgggtgatgcggcaaaagtaaaacgcccagaaaacttc
gctgaaggtattgtgatttgtaacccaccgtacggtgagcgtttaggcactcatcccggt
ttgatcgctctttacactgcatttggtgcacagcttaaagctgagtttggtggttgccac
gcttctattttctcgagttctgacgaattactcagttgtttgcgcatgcgtgcggacaaa
cagttcaagctgaataatggtgcgttaccatgtcaccaaaaaaattacaccatagccatg
cgagagcaaaacagcgtcagcaatgaaggtactcaagaaatcctcattgcccccgatttt
gccaaccgtttgaagaaaaacttcaacaagattggcaaatgggctaagcgtgaggggctc
gattgcttccgcctctatgatgcggatcttcccgaatacaatgtggctattgatgtctac
caagatcatctcatgatccaagaatatgcagcgccaaaggatattcctgaagagaaagcg
aagcgtcgtttgaccgatattattcgcgcagccattcaagtgttggatgtcgatgcgaac
aacgtcgtgctcaaagttcgtgaaagacaaaaaggcacgtcgcaatacgagaaactcggc
cagcaagcacagaccatgcaaattaccgagtatggcgtgaagttgatcgtcaacctatac
gattatctcgatactggcttattccttgaccacaaaattactcgtcgtcgtttagggcaa
atggcacaaggcaaagattttctcaatttatttgcctataccggctctgcgacagtacat
gctgcttgtggcggtgcaaaatcgacgacgaccgtcgatatgtcgaaaacttatcttgaa
tgggccaaagagaacatgcagttaaacgggcaggttgggcgtcagcaccagtacgttcag
gccgactgtctacagtggctcgcgaatgcccaaagccagtacgatcttatctttattgat
ccgccaacgttttctaactctaaacgtatggagcagacttttgatgtgcaacgtgaccac
gtcacgcttatgaccaatcttaaacggttgctgcgcccagaagggacgattgttttctct
aataacaagcgccatttcaagatggatatggaagcgctacacgctttgggcctcaacgct
caaaatatctcgcatcaaaccttaccgctggattttgagcgaaataaacaaattcataac
tgctggctgatcacccatcagagttag
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