Vibrio cholerae O1 El Tor N16961: VC_1231
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Entry
VC_1231 CDS
T00034
Name
(GenBank) cytidine deaminase
KO
K01489
cytidine deaminase [EC:
3.5.4.5
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch00240
Pyrimidine metabolism
vch01100
Metabolic pathways
vch01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VC_1231
Enzymes [BR:
vch01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.5 cytidine deaminase
VC_1231
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Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_2
dCMP_cyt_deam_1
DUF5447
Gta3
Zn_ribbon_TOP3B
APOBEC_N
SNAD4
Motif
Other DBs
NCBI-ProteinID:
AAF94390
UniProt:
Q9KSM5
Structure
PDB
PDBj
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All DBs
Position
I:complement(1305061..1305948)
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AA seq
295 aa
AA seq
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MRNRIEQALQQMPASFAPYLRELVLAKDFDATFSAEQYQQLLTLSGLEDADLRVALLPIA
AAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQTVHAEQCAISHAWMKGEKGVA
DITINFSPCGHCRQFMNELTTASSLKIQLPKRAAKTLQEYLPESFGPADLGIDSGLMSPV
NHGKTSDDDEELIQQALRAMNISHSPYTQNFSGVALKMRSGAIYLGAYAENAAFNPSLPP
LQVALAQAMMMGESFEDIEAAALVESATGKISHLADTQATLEVINPDIPLSYLSL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaccgtattgaacaagcattacaacaaatgcctgcttcttttgccccatattta
cgtgaattggtgttggccaaggatttcgatgccactttctctgccgagcagtatcagcag
cttttgaccctttcgggtctggaagatgccgatttgcgcgtcgcgctgttacctatcgct
gccgcttactcgtatgcccccatctctgaattttatgttggtgcaattgtacgtggcatc
tccggccgcctctatctgggtgccaatatggaatttactggtgcgcagcttgggcaaacc
gtacatgctgagcagtgcgccattagccatgcgtggatgaaaggggaaaaaggggtggca
gacatcaccatcaattttagcccttgcggccattgccgccagtttatgaatgaactgacc
accgcgtcttcgctgaaaattcaactgcccaagcgtgctgccaaaactttgcaagagtac
ctccctgagtcgtttggccctgccgatctcggcattgattctggcctgatgagcccggtc
aatcatggtaaaaccagtgacgatgatgaagagctgatccagcaagccctgcgcgcgatg
aacatcagccactcgccttatacccaaaacttcagtggggttgcactgaaaatgcgcagt
ggcgcgatttaccttggcgcgtatgctgaaaatgctgcgtttaacccaagtttgccaccg
ctacaagttgccttagcacaagcgatgatgatgggtgaatcattcgaggatattgaagcc
gccgctctggtagagagtgcaaccggcaaaatcagccatcttgccgatactcaagcaacg
ctggaagtgatcaatcccgatattccactttcttatctctcactgtaa
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