Vibrio cholerae O1 El Tor N16961: VC_A0929
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Entry
VC_A0929 CDS
T00034
Name
(GenBank) TrmA family RNA methyltransferase, putative
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vch03009
]
VC_A0929
Enzymes [BR:
vch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
VC_A0929
Ribosome biogenesis [BR:
vch03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VC_A0929
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
Cons_hypoth95
Methyltransf_4
TRM5-TYW2_MTfase
Methyltransf_32
Methyltransf_12
TehB
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AAF96826
UniProt:
Q9KL20
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All DBs
Position
II:complement(882048..883175)
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AA seq
375 aa
AA seq
DB search
MQCEFFIQKRCTSCHLCAQPYSEQVTNKDQQLRELIAPATDVQWLPPVTSADTAFRNKAK
MVVLGAAHAPILGIEDAQGQPLSLVTCPLYPQPMQELLAYLENWIRIAGIPPYNKLKKKG
ELKFILLTRSENSGQFMLRFVARSHAVLERIERNLPTLIAAFPMIEVISVNIQPVHMARL
EGEEEIFLTETQSLLEHFNDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDL
FCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSA
PELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAELSSYQMIRVQWFDMF
PHTDHAEVLTLLVRK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtgagttctttattcaaaaacggtgtacctcttgccacctatgtgcgcagccg
tattccgagcaggttacgaataaagatcagcagttgcgcgagttgattgcgccagccacg
gatgtgcagtggttaccccctgtcaccagtgctgacaccgcgtttcgcaataaagccaaa
atggtggtgcttggtgcggctcacgcgccgattttaggcattgaagatgcgcaaggtcag
cctttgtcgctagtgacttgcccgctttatccgcagccgatgcaagagctgctcgcttat
ctggaaaactggatccgcattgcgggtattccaccctataacaagctgaagaaaaaaggt
gagctgaagtttattctgctcacccgcagtgaaaacagcggccaatttatgctgcgtttt
gtggcgcgcagccatgcggtgcttgagcgaattgaacgcaatttgccaacattgatcgca
gctttcccgatgatcgaagtcatttccgtcaatatccagccggtgcatatggcgcgttta
gaaggcgaagaggaaattttcctcaccgaaacccaaagcctgcttgaacacttcaacgat
gtgcctatggtgatccgcccgaaaagctttttccaaaccaaccccaaagtggctgagcag
ctatacgcgaccgcacgtacttgggtgcgcgagattgcgccaacgcaaatgtgggatctg
ttttgtggcgtcggtggctttgcgctgcattgcgccgcgccagacactgctgtgacgggc
attgaaattgaaccagaagcgattgccagcgcgcaacgttcggcgcaaatgatggggatt
gataatctcagctttgcagcgctcgattctgccaagttttcacaaagccagatgagtgcg
ccagagttagtgttggtcaaccctccacgtcgtggtttgggcagcgaactgaccgcgcaa
ttggaagcgctcgcaccaaaatacattctttattccagctgtaacccgcaaactatggtt
aaagacatcgctgagctttccagttaccaaatgattcgcgtgcagtggtttgatatgttc
ccgcatacagatcacgctgaagtgctgaccttgttggtcagaaaatag
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