KEGG   Vidua chalybeata (village indigobird): 128787773
Entry
128787773         CDS       T11587                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
vcha  Vidua chalybeata (village indigobird)
Pathway
vcha03420  Nucleotide excision repair
vcha04110  Cell cycle
vcha04114  Oocyte meiosis
vcha04120  Ubiquitin mediated proteolysis
vcha04141  Protein processing in endoplasmic reticulum
vcha04310  Wnt signaling pathway
vcha04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:vcha00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    128787773 (RBX1)
   04120 Ubiquitin mediated proteolysis
    128787773 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    128787773 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    128787773 (RBX1)
   04350 TGF-beta signaling pathway
    128787773 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    128787773 (RBX1)
   04114 Oocyte meiosis
    128787773 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vcha04121]
    128787773 (RBX1)
   03400 DNA repair and recombination proteins [BR:vcha03400]
    128787773 (RBX1)
Enzymes [BR:vcha01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     128787773 (RBX1)
Ubiquitin system [BR:vcha04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   128787773 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     128787773 (RBX1)
   Cul2 complex
     128787773 (RBX1)
   Cul3 complex
     128787773 (RBX1)
   Cul4 complex
     128787773 (RBX1)
   Cul7 complex
     128787773 (RBX1)
   Cul8 complex
     128787773 (RBX1)
   Cul9 complex
     128787773 (RBX1)
DNA repair and recombination proteins [BR:vcha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      128787773 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      128787773 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-RING_11 zf-C3HC4_2 DUF8003
Other DBs
NCBI-GeneID: 128787773
NCBI-ProteinID: XP_053798175
LinkDB
Position
5:complement(18763138..18774031)
AA seq 145 aa
MPWSGLRRSLSSDAAAPTGLGYSIPRARAGEQRWSASSSPSPPAAVAQPPGLPHMLRKKL
SANWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHC
ISRWLKTRQVCPLDNREWEFQKYGH
NT seq 438 nt   +upstreamnt  +downstreamnt
atgccctggtcggggctccgccgctcgctctcctccgacgctgccgccccaacaggcctc
ggctactccatacccagagctcgggcgggcgagcagcgctggagtgcttccagctccccg
tcacccccggccgctgtggcccagccgcccgggctgcctcatatgctgcgtaaaaagctt
tctgcaaattggaacgccgtagctctgtgggcatgggacattgtggttgataactgtgcc
atttgcagaaaccacattatggatctatgcatagaatgtcaagccaaccaggcatcggct
acctctgaggaatgcacagtagcatggggcgtctgcaatcacgctttccacttccactgc
atctctcgctggctcaaaactcgccaagtatgtccgctggacaacagggaatgggagttc
caaaagtatggacactag

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